Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AC093831.2-201ENST00000624393 3427 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS52Q8N1B4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 Y_RNA.86-201ENST00000363020 111 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 RNU6-270P-201ENST00000364131 105 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 Y_RNA.378-201ENST00000365652 113 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 SNORA75B-201ENST00000384053 137 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 RNU6-45P-201ENST00000384471 107 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 MIR578-201ENST00000384828 96 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 RNU2-68P-201ENST00000410878 191 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 BX682237.1-201ENST00000415016 335 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 RPL21P111-201ENST00000418453 477 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AC006445.2-201ENST00000510061 472 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AC091826.1-201ENST00000514065 313 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 RNA5SP385-201ENST00000515947 110 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 RNA5SP356-201ENST00000515972 94 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AC090115.3-201ENST00000553218 849 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AC010653.1-201ENST00000571108 881 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 MIR5692A1-201ENST00000580523 69 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AC007938.3-201ENST00000604965 623 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AC092807.2-201ENST00000609367 243 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AL355073.2-201ENST00000612106 557 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 DUSP12P1-201ENST00000612874 516 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS52Q8N1B4 U6.42-201ENST00000618440 107 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AC092794.2-201ENST00000620933 563 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AC022418.1-201ENST00000624118 445 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 AC090617.10-201ENST00000624308 134 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 U2.21-201ENST00000637295 81 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VPS52Q8N1B4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
VPS52Q8N1B4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.25□□□□□ -1.89
VPS52Q8N1B4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 GABRG2-229ENST00000641017 3628 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 SNORA72.1-201ENST00000363485 129 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 RNU4-26P-201ENST00000410270 107 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 Y_RNA.615-201ENST00000410769 117 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 BMS1P22-201ENST00000414726 313 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC245054.2-201ENST00000415639 319 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 UQCRHP3-201ENST00000451503 251 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC008716.1-201ENST00000511084 513 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC112206.3-201ENST00000514578 389 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 RNA5SP367-201ENST00000516557 118 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC023050.3-201ENST00000541142 333 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 LRRC37A5P-203ENST00000580181 585 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 MIR3609-201ENST00000582661 80 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 MIR4506-201ENST00000584693 77 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 BNIP3P25-201ENST00000596023 559 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC073539.2-201ENST00000597113 165 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC103705.1-201ENST00000619013 241 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC009033.1-201ENST00000624279 431 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AL008636.1-201ENST00000625038 1018 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 MTND5P19-201ENST00000424872 1794 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC009487.2-201ENST00000420969 6821 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 AC108206.1-201ENST00000570186 4159 ntBASIC3.24□□□□□ -1.89
VPS52Q8N1B4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS52Q8N1B4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS52Q8N1B4 Y_RNA.100-201ENST00000363141 102 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 Y_RNA.160-201ENST00000363677 92 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 SNORA46-201ENST00000384762 135 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 RNU6-1025P-201ENST00000410629 104 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 RNU6-1148P-201ENST00000410992 104 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 POLHP1-201ENST00000411806 470 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 RPL21P90-201ENST00000415692 466 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 AL353621.1-201ENST00000418219 243 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 AL645937.1-202ENST00000421799 937 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS52Q8N1B4 BRK1P2-201ENST00000442875 223 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 AL135938.1-201ENST00000443141 297 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 RNU7-167P-201ENST00000459160 62 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 DYNLL1P5-201ENST00000467158 270 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 AC010486.1-201ENST00000511793 424 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 RNU6-1038P-201ENST00000516516 104 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 RNU6-703P-201ENST00000516946 107 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS52Q8N1B4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
VPS52Q8N1B4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS52Q8N1B4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms