Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 AC090616.2-202ENST00000584248 222 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 AC025165.5-201ENST00000602802 578 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 AL022161.1-201ENST00000604390 213 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 AL359547.2-201ENST00000615810 418 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 AP003400.5-201ENST00000624827 617 ntBASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.97□□□□□ -2.09
NUDCD3Q8IVD9 RN7SKP158-201ENST00000410453 326 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 RNU4-53P-201ENST00000410828 140 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AL139156.1-201ENST00000412785 841 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AC009518.2-201ENST00000418056 731 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 ELOCP4-201ENST00000420090 333 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AL139413.1-201ENST00000421309 217 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 UBE2D3P4-201ENST00000441973 436 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 RNU7-125P-201ENST00000458760 62 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 RPL7P43-201ENST00000478876 753 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AC140059.1-201ENST00000489238 361 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AC108078.2-201ENST00000510750 236 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 RNU5B-3P-201ENST00000516601 115 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AC022878.1-201ENST00000530684 149 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AC118273.2-201ENST00000532092 465 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AC026464.5-201ENST00000562497 722 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AC092325.1-201ENST00000566449 554 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 DEFB131E-202ENST00000602581 683 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 WISP1-OT1-201ENST00000602893 642 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AC093424.1-201ENST00000604999 338 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AC087045.1-201ENST00000605856 382 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 MIR6873-201ENST00000622788 63 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 AC103710.2-202ENST00000641454 2853 ntBASIC1.96□□□□□ -2.1
NUDCD3Q8IVD9 RNU6-858P-201ENST00000362436 107 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 RNU4-82P-201ENST00000362443 140 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 Y_RNA.560-201ENST00000384689 102 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 CISD1P1-201ENST00000393907 327 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 RNU2-63P-201ENST00000410792 194 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 Y_RNA.623-201ENST00000411128 95 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AL365338.1-201ENST00000422282 858 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 RPL7P34-201ENST00000433316 712 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 USP9YP15-201ENST00000442391 422 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 KATNBL1P6-201ENST00000453433 915 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 UBE2DNL-203ENST00000474922 222 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AC119751.5-201ENST00000514077 770 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AC112206.3-201ENST00000514578 389 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 RNU6-123P-201ENST00000516163 102 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 Y_RNA.672-201ENST00000516289 104 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 MIR548AB-201ENST00000584917 84 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AC007229.1-201ENST00000590455 412 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AC068276.1-201ENST00000605793 379 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 AC012409.4-201ENST00000612923 249 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 SDR42E1P4-201ENST00000620894 481 ntBASIC1.95□□□□□ -2.1
NUDCD3Q8IVD9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AC131280.1-202ENST00000624067 4211 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 MIR449A-201ENST00000362113 91 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 SNORA24.1-201ENST00000384401 135 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 MIR558-201ENST00000384920 94 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AL160275.3-201ENST00000423876 471 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 RPS24P1-201ENST00000438550 371 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 TAF9P1-201ENST00000445421 515 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 TAF9P2-201ENST00000454958 515 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 RPL30P6-201ENST00000475925 342 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AC117522.2-201ENST00000510049 657 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 RNU6-1220P-201ENST00000517126 108 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 OR5AQ1P-201ENST00000527596 927 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 FAM92A1P1-201ENST00000528023 890 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 ADI1P3-201ENST00000549509 470 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 RPL21P5-201ENST00000554662 472 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AC008015.1-201ENST00000555505 465 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 MIR4435-1-201ENST00000582552 80 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 MIR4760-201ENST00000585040 80 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AL355297.2-201ENST00000604792 129 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AC018638.7-201ENST00000605836 1114 ntBASIC1.94□□□□□ -2.1
NUDCD3Q8IVD9 AL451064.1-201ENST00000607718 471 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms