Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 SNORA31.1-201ENST00000515993 133 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 SNORA31.5-201ENST00000516190 133 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 Y_RNA.682-201ENST00000516457 100 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 RNU6-1069P-201ENST00000516612 133 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AP003122.3-201ENST00000526316 255 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AC084851.1-201ENST00000529105 249 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 ELOCP31-201ENST00000540463 467 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 MIR5692C1-201ENST00000585309 91 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AC073539.2-201ENST00000597113 165 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AC008121.3-201ENST00000618726 433 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AC103988.1-201ENST00000566382 2177 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 RNU6-474P-201ENST00000384243 107 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AL357075.1-201ENST00000404107 726 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 VN1R36P-201ENST00000414936 291 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AL139396.1-201ENST00000421137 167 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AL158156.1-201ENST00000422509 473 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 Z82210.1-201ENST00000440037 231 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 HMGB1P30-201ENST00000492455 606 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 RPL30P5-201ENST00000494923 336 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AC110794.1-201ENST00000505816 425 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AC008716.1-201ENST00000511084 513 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 RPL39P5-202ENST00000512505 151 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 RNU6-1088P-201ENST00000516850 104 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AC245166.1-201ENST00000521012 253 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 MIR3171-201ENST00000584270 74 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 MIR3672-201ENST00000584290 82 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 SNRPGP17-201ENST00000603780 214 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AL355802.3-201ENST00000607571 545 ntBASIC3.27□□□□□ -1.89
RFX6Q8HWS3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.27□□□□□ -1.89
RFX6Q8HWS3 MTND4P27-201ENST00000450813 1354 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 Y_RNA.128-201ENST00000363391 112 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 Y_RNA.212-201ENST00000364177 102 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 Y_RNA.387-201ENST00000383918 102 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 MIR548P-201ENST00000408336 84 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 U3.42-201ENST00000408746 214 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 RNU6-1025P-201ENST00000410629 104 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 RNA5SP38-201ENST00000410750 119 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 AC245054.2-201ENST00000415639 319 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 AC107399.1-201ENST00000451226 265 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 Y_RNA.639-201ENST00000458981 102 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 AC117503.1-201ENST00000472241 394 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 MTND3P25-201ENST00000509243 135 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 PHBP14-201ENST00000512887 367 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 RNU6-566P-201ENST00000516790 107 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 RNU6-323P-201ENST00000521915 107 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 MIR1254-2-201ENST00000579553 63 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 AC023043.2-201ENST00000589678 1026 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 AL359693.1-201ENST00000614959 2407 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.26□□□□□ -1.89
RFX6Q8HWS3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.26□□□□□ -1.89
RFX6Q8HWS3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.25□□□□□ -1.89
RFX6Q8HWS3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.25□□□□□ -1.89
RFX6Q8HWS3 Y_RNA.216-201ENST00000364205 93 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 RNU6-266P-201ENST00000364225 107 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 SNORA14A-201ENST00000364773 135 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 Y_RNA.315-201ENST00000365117 102 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 RNU6-128P-201ENST00000383976 107 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 RNU6-43P-201ENST00000384302 107 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 RNU6-1160P-201ENST00000384546 104 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 MIR183-201ENST00000384958 110 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 MIR449B-201ENST00000384995 97 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 MIR548F5-201ENST00000408421 86 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFX6Q8HWS3 AC074085.1-201ENST00000413598 418 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 AL353621.1-201ENST00000418219 243 ntBASIC3.25□□□□□ -1.89
RFX6Q8HWS3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms