Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4DQ86TL0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
ATG4DQ86TL0 NOL8P1-201ENST00000508336 3529 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AC087190.4-201ENST00000574616 8334 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
ATG4DQ86TL0 RNU6-312P-201ENST00000364629 107 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.331-201ENST00000365267 102 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 SNORD116-14-201ENST00000383894 92 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 SNORD116-17-201ENST00000383929 92 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 RNU6-211P-201ENST00000384047 107 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 SNORD116-15-201ENST00000384445 92 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 SNORD116-20-201ENST00000384529 92 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 SNORA20-201ENST00000384662 132 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 SNORD116-19-201ENST00000384729 92 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 RNA5SP213-201ENST00000391031 106 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG4DQ86TL0 MTND4LP9-201ENST00000427694 174 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4DQ86TL0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AC087588.1-201ENST00000462203 316 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AC011276.1-201ENST00000469688 323 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AC022795.1-201ENST00000473808 480 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 RN7SL812P-201ENST00000493791 279 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AC015795.1-201ENST00000513669 327 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.686-201ENST00000516548 134 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 IGLV3-26-201ENST00000520756 302 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.98□□□□□ -1.77
ATG4DQ86TL0 TGIF1P1-201ENST00000558095 802 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 MIR548X2-201ENST00000579776 100 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AL133393.1-201ENST00000603277 287 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AL161798.1-201ENST00000604630 131 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AC107294.1-201ENST00000609524 467 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 MIR7154-201ENST00000620673 73 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 AC011944.2-201ENST00000624440 683 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 snoU18.1-201ENST00000629629 71 ntBASIC3.98□□□□□ -1.77
ATG4DQ86TL0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4DQ86TL0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
ATG4DQ86TL0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 ASNSP1-201ENST00000518311 1939 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 MAPK10-304ENST00000641341 3984 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.238-201ENST00000364441 102 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 BTF3L4P2-201ENST00000392798 346 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 AL513331.1-201ENST00000411908 397 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 AP000907.1-201ENST00000428428 510 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 AL353705.4-201ENST00000449661 238 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 ABCF2P2-201ENST00000450549 296 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 RNU6-1211P-201ENST00000459179 105 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 RPS23P7-201ENST00000466210 444 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 RPS26P28-201ENST00000470806 348 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 AL356218.2-201ENST00000605264 187 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 SCARNA4-201ENST00000629045 128 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 MIR4496-201ENST00000635896 61 ntBASIC3.97□□□□□ -1.77
ATG4DQ86TL0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4DQ86TL0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
ATG4DQ86TL0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.96□□□□□ -1.77
ATG4DQ86TL0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.96□□□□□ -1.77
ATG4DQ86TL0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
ATG4DQ86TL0 RNU1-15P-201ENST00000353977 144 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 Y_RNA.7-201ENST00000362352 102 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 RNU6-1255P-201ENST00000363434 112 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 Y_RNA.182-201ENST00000363880 111 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
ATG4DQ86TL0 RNU6-968P-201ENST00000384076 107 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.96□□□□□ -1.78
ATG4DQ86TL0 AC008065.1-201ENST00000428525 348 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 TBCAP1-201ENST00000436520 327 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 RPS27AP9-201ENST00000477681 438 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 SNORA25.12-201ENST00000516202 82 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 SUMO2P18-201ENST00000518873 252 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.96□□□□□ -1.78
ATG4DQ86TL0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.96□□□□□ -1.78
ATG4DQ86TL0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.96□□□□□ -1.78
ATG4DQ86TL0 AL590392.1-201ENST00000604960 446 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.96□□□□□ -1.78
ATG4DQ86TL0 MIR6830-201ENST00000636015 70 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ATG4DQ86TL0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.96□□□□□ -1.78
ATG4DQ86TL0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4DQ86TL0 AC009541.1-201ENST00000438279 2662 ntBASIC3.96□□□□□ -1.78
ATG4DQ86TL0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4DQ86TL0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms