Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC080013.4-201ENST00000607624 649 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AC240442.1-201ENST00000616055 283 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 RNU6-1187P-201ENST00000364771 110 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 RNU6-611P-201ENST00000384276 104 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 MIR525-201ENST00000384978 85 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AC078974.1-201ENST00000411597 223 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 C1DP1-201ENST00000426049 402 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AL049734.2-201ENST00000441066 616 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AC112492.4-201ENST00000456549 352 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 RPL32P14-201ENST00000463196 378 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AP000403.1-201ENST00000603349 851 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AC010900.2-201ENST00000604508 210 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AC016925.2-201ENST00000605108 242 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AC006213.4-201ENST00000616184 634 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 RNU6-921P-201ENST00000384361 107 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 MIR518A2-201ENST00000384966 87 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 RNU2-15P-201ENST00000410692 191 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AL358794.1-201ENST00000445689 381 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 PGBD4P5-201ENST00000445958 426 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 RPL21P47-201ENST00000483696 477 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AP001025.1-201ENST00000486139 332 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AC008443.7-201ENST00000622195 246 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.34□□□□□ -2.35
CSMD3Q7Z407 RNU6-741P-201ENST00000383889 107 ntBASIC0.34□□□□□ -2.35
CSMD3Q7Z407 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.34□□□□□ -2.35
CSMD3Q7Z407 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.34□□□□□ -2.35
CSMD3Q7Z407 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.34□□□□□ -2.35
CSMD3Q7Z407 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
CSMD3Q7Z407 RNU6-202P-201ENST00000515998 96 ntBASIC0.34□□□□□ -2.35
CSMD3Q7Z407 DEFB108D-201ENST00000527787 222 ntBASIC0.34□□□□□ -2.35
CSMD3Q7Z407 MIR4661-201ENST00000582720 75 ntBASIC0.34□□□□□ -2.35
CSMD3Q7Z407 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
CSMD3Q7Z407 Z75746.1-201ENST00000440243 2080 ntBASIC0.34□□□□□ -2.35
CSMD3Q7Z407 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC092634.2-201ENST00000428146 1010 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AL353706.1-201ENST00000436728 494 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 SNRPEP7-201ENST00000438350 220 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AL096803.2-201ENST00000450032 677 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 MTND2P24-201ENST00000453434 806 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC114982.1-201ENST00000469402 321 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC019288.1-201ENST00000557918 224 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC013244.3-201ENST00000605614 388 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 MIR8074-201ENST00000615081 81 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC092125.1-201ENST00000562568 1995 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 RNU1-124P-201ENST00000363861 145 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 HMGB1P17-201ENST00000403495 628 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC015724.1-201ENST00000478577 156 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 HMGB1P36-201ENST00000487709 576 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 SCARNA3-201ENST00000517097 143 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC136628.3-201ENST00000521868 290 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC068620.3-201ENST00000602749 560 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC012669.1-201ENST00000603209 283 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AL161729.4-201ENST00000604650 476 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC092953.2-201ENST00000608000 699 ntBASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.34□□□□□ -2.36
CSMD3Q7Z407 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 PRELID3BP1-201ENST00000457142 540 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC099513.1-201ENST00000490423 301 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC021146.2-201ENST00000504736 556 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC021851.1-201ENST00000608537 1082 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC011939.3-201ENST00000613686 466 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC092192.1-201ENST00000633154 1018 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC008163.1-202ENST00000636004 2889 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC138393.1-203ENST00000327086 343 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 SNORA22-201ENST00000383907 134 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 Y_RNA.457-201ENST00000384237 111 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 SNORA22C-201ENST00000384614 134 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 PNRC2P1-201ENST00000423940 420 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms