Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 SNORA80A-201ENST00000363922 136 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 RNU6-128P-201ENST00000383976 107 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 RNU6-692P-201ENST00000384496 107 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 Y_RNA.579-201ENST00000390939 94 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 U3.26-201ENST00000391236 204 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 MTCYBP4-201ENST00000401524 249 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 ATG3P1-201ENST00000419507 911 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 RPL23AP22-201ENST00000437556 453 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 RPL23AP31-201ENST00000456160 467 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 RPL23AP62-201ENST00000463396 453 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 AC117503.1-201ENST00000472241 394 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 RPL31P60-201ENST00000478450 367 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 AL049874.1-201ENST00000489560 388 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 AC097462.2-201ENST00000504623 481 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 RN7SKP24-201ENST00000515888 284 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 RNU6-1170P-201ENST00000515974 106 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 AL163153.1-201ENST00000554223 283 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 AL121821.2-201ENST00000556081 394 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 AC020661.2-201ENST00000560114 134 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 MIR5047-201ENST00000579212 100 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 AC138761.3-201ENST00000579993 334 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 AC012119.1-201ENST00000603184 222 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 AL133215.3-201ENST00000609801 448 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 PART1_1.1-201ENST00000611761 217 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 AC090971.5-201ENST00000621102 293 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 MTND4LP32-201ENST00000636111 270 ntBASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AC000403.1-201ENST00000613696 3585 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AC116096.1-201ENST00000566804 2314 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 UBE2L2-201ENST00000254302 429 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 Y_RNA.480-201ENST00000384364 102 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AL353729.1-201ENST00000425044 720 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 SNAP23P1-201ENST00000433229 246 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 RPS24P13-201ENST00000442520 397 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 HMGN2P16-201ENST00000456802 261 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 snoU13.4-201ENST00000458916 104 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 RPL21P104-201ENST00000464143 478 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AC087884.1-201ENST00000469738 328 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 RPS20P22-201ENST00000473700 357 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 RN7SL20P-201ENST00000488827 297 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AC005741.1-201ENST00000511094 432 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 RNA5SP217-201ENST00000515959 91 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 APOOP3-201ENST00000536787 586 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 SYF2P1-201ENST00000550658 413 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AC124303.1-201ENST00000605703 360 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AL627309.6-201ENST00000606857 840 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AC107294.1-201ENST00000609524 467 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AC098657.3-201ENST00000620434 263 ntBASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UBE3BQ7Z3V4 AP001148.1-201ENST00000624124 2359 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 Y_RNA.482-201ENST00000384377 111 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 MIR1290-201ENST00000408735 78 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 Z85995.1-201ENST00000415547 335 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 AC022018.1-201ENST00000430685 241 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 AL139132.1-201ENST00000431587 344 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 AL360271.2-201ENST00000447710 161 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 RPL37P4-201ENST00000448908 268 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 RPS27P29-201ENST00000463110 252 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 RPS27P27-201ENST00000498779 255 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 SUMO2P6-201ENST00000505273 288 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 AL359273.1-201ENST00000510918 627 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 TBCAP3-201ENST00000512475 312 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 SNORA31.8-201ENST00000516327 108 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 RNA5SP471-201ENST00000516971 106 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 MIR5692A1-201ENST00000580523 69 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 AC073539.2-201ENST00000597113 165 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 AC098826.3-201ENST00000603823 466 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 AC007318.2-201ENST00000620999 243 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 AL365361.1-201ENST00000566942 3481 ntBASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3BQ7Z3V4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.76□□□□□ -1.81
UBE3BQ7Z3V4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBE3BQ7Z3V4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms