Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AC139495.1-202ENST00000513164 354 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 RNU4-71P-201ENST00000516258 113 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 SNORA31.8-201ENST00000516327 108 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AC022868.1-201ENST00000517767 391 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 MRPS36P4-201ENST00000534436 298 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AC010186.2-204ENST00000537668 439 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 TRAV28-201ENST00000557548 323 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 BX284668.6-201ENST00000606899 438 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AC240442.1-201ENST00000616055 283 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AC099506.2-201ENST00000623074 221 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AC097372.5-201ENST00000623665 376 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AC011944.2-201ENST00000624440 683 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 BMS1P21-201ENST00000634565 365 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 U2.22-201ENST00000636441 106 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF111Q6ZNA4 MARK2P15-201ENST00000432204 2186 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 AC009541.1-201ENST00000438279 2662 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF111Q6ZNA4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RNF111Q6ZNA4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
RNF111Q6ZNA4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF111Q6ZNA4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF111Q6ZNA4 AC233981.2-201ENST00000611524 1614 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4□□□□□ -1.77
RNF111Q6ZNA4 Y_RNA.180-201ENST00000363867 113 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 RNY1-201ENST00000364228 113 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 U3.15-201ENST00000365398 212 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 RNU6-937P-201ENST00000384325 106 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 BTF3L4P2-201ENST00000392798 346 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4□□□□□ -1.77
RNF111Q6ZNA4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4□□□□□ -1.77
RNF111Q6ZNA4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4□□□□□ -1.77
RNF111Q6ZNA4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4□□□□□ -1.77
RNF111Q6ZNA4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4□□□□□ -1.77
RNF111Q6ZNA4 AC010265.1-201ENST00000513509 211 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 MIR2355-201ENST00000517199 87 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 AC006064.5-201ENST00000541782 248 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 AC120057.2-201ENST00000571520 271 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 AC090617.3-201ENST00000573670 475 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 IPO5P1-202ENST00000600039 287 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 MIR378J-201ENST00000611988 109 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 AC114781.5-201ENST00000615297 108 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4□□□□□ -1.77
RNF111Q6ZNA4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF111Q6ZNA4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4□□□□□ -1.77
RNF111Q6ZNA4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF111Q6ZNA4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
RNF111Q6ZNA4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4□□□□□ -1.77
RNF111Q6ZNA4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RNF111Q6ZNA4 AL359693.1-201ENST00000614959 2407 ntBASIC4□□□□□ -1.77
RNF111Q6ZNA4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 Y_RNA.581-201ENST00000391017 97 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 SNORD58.1-201ENST00000391313 66 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 AL157831.1-201ENST00000426134 473 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 SNRPEP9-201ENST00000436794 238 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 snoU13.30-201ENST00000458951 104 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 AC109327.1-201ENST00000471666 403 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 AL592156.1-201ENST00000508758 304 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 RNU6-406P-201ENST00000516470 107 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 TRAV8-5-201ENST00000537369 341 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 TVP23BP1-201ENST00000557500 617 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 MIR4659A-201ENST00000580269 81 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 AC010928.2-201ENST00000588017 287 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 AC136601.2-201ENST00000604356 474 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 AC027309.3-201ENST00000623419 351 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 AL773545.4-201ENST00000637262 310 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 AL513478.4-201ENST00000641636 310 ntBASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RNF111Q6ZNA4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms