Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 AL031577.2-201ENST00000404133 280 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 AC004865.1-201ENST00000442276 1003 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 AC025465.3-201ENST00000510570 311 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 AC080013.4-201ENST00000607624 649 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 AC006213.5-201ENST00000619673 288 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 AC099654.5-201ENST00000636479 350 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 RNU1-23P-201ENST00000363361 144 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 RNU6-439P-201ENST00000384188 106 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 MIR329-2-201ENST00000385029 84 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 AC125611.1-201ENST00000549563 229 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 AC006213.4-201ENST00000616184 634 ntBASIC0.48□□□□□ -2.33
CCDC18Q5T9S5 RNU6-105P-201ENST00000363909 104 ntBASIC0.47□□□□□ -2.33
CCDC18Q5T9S5 MIR29C-201ENST00000385231 88 ntBASIC0.47□□□□□ -2.33
CCDC18Q5T9S5 HMGB1P17-201ENST00000403495 628 ntBASIC0.47□□□□□ -2.33
CCDC18Q5T9S5 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.47□□□□□ -2.33
CCDC18Q5T9S5 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.47□□□□□ -2.33
CCDC18Q5T9S5 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC18Q5T9S5 AC087588.2-201ENST00000617667 426 ntBASIC0.47□□□□□ -2.33
CCDC18Q5T9S5 AL359854.1-201ENST00000614203 1594 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 RNU6-217P-201ENST00000384164 104 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 RNU6-31P-201ENST00000384388 108 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 MTCO1P44-201ENST00000441935 243 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 RNU5A-7P-201ENST00000515979 116 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 EIF4A1P12-201ENST00000551910 141 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 AC015688.2-201ENST00000584523 262 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 MTCO2P2-201ENST00000591258 225 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 VN1R82P-201ENST00000601481 356 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 AC022387.2-201ENST00000604050 448 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 AC010738.1-201ENST00000604970 987 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 uc_338.14-201ENST00000613162 166 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 MIR6718-201ENST00000616153 80 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 MIR8065-201ENST00000620577 100 ntBASIC0.46□□□□□ -2.34
CCDC18Q5T9S5 SNORD115-3-201ENST00000363100 82 ntBASIC0.45□□□□□ -2.34
CCDC18Q5T9S5 RNU1-96P-201ENST00000364163 162 ntBASIC0.45□□□□□ -2.34
CCDC18Q5T9S5 Y_RNA.518-201ENST00000384552 113 ntBASIC0.45□□□□□ -2.34
CCDC18Q5T9S5 MIR608-201ENST00000384820 100 ntBASIC0.45□□□□□ -2.34
CCDC18Q5T9S5 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.45□□□□□ -2.34
CCDC18Q5T9S5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.45□□□□□ -2.34
CCDC18Q5T9S5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC18Q5T9S5 SNORA4.1-201ENST00000364263 144 ntBASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 MTCO1P56-201ENST00000401674 224 ntBASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 MIR1912-201ENST00000410389 80 ntBASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 MTCO1P53-201ENST00000441633 699 ntBASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 AL353691.1-201ENST00000451332 387 ntBASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 AC091435.1-201ENST00000505442 584 ntBASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 SNORA48.9-201ENST00000516419 162 ntBASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 APOOP3-201ENST00000536787 586 ntBASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 AL161729.4-201ENST00000604650 476 ntBASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 AC134026.1-201ENST00000623249 2239 ntBASIC0.44□□□□□ -2.34
CCDC18Q5T9S5 AC138393.1-203ENST00000327086 343 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 MIR32-201ENST00000384965 70 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 MIR95-201ENST00000385072 81 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 MRPL35P1-201ENST00000404272 572 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 AC027119.1-201ENST00000440877 241 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 AC006512.1-201ENST00000468816 291 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 AC108729.1-201ENST00000487812 947 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 AL139344.1-201ENST00000605228 195 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 AC018926.3-201ENST00000618841 406 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 ZNF663P-202ENST00000641770 1131 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 MTCO1P23-201ENST00000415223 1526 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.43□□□□□ -2.34
CCDC18Q5T9S5 AC004854.1-201ENST00000440356 349 ntBASIC0.42□□□□□ -2.34
CCDC18Q5T9S5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CCDC18Q5T9S5 KATNBL1P6-201ENST00000453433 915 ntBASIC0.42□□□□□ -2.34
CCDC18Q5T9S5 AC087477.1-201ENST00000465747 340 ntBASIC0.42□□□□□ -2.34
CCDC18Q5T9S5 AC018868.1-201ENST00000491307 315 ntBASIC0.42□□□□□ -2.34
CCDC18Q5T9S5 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.42□□□□□ -2.34
CCDC18Q5T9S5 SNORA77B-201ENST00000578179 125 ntBASIC0.42□□□□□ -2.34
CCDC18Q5T9S5 AC008751.2-201ENST00000597885 980 ntBASIC0.42□□□□□ -2.34
CCDC18Q5T9S5 AC027335.2-201ENST00000624030 375 ntBASIC0.42□□□□□ -2.34
CCDC18Q5T9S5 RNA5SP100-201ENST00000410903 110 ntBASIC0.41□□□□□ -2.34
CCDC18Q5T9S5 RNA5SP59-201ENST00000410922 110 ntBASIC0.41□□□□□ -2.34
CCDC18Q5T9S5 MRPS36P1-201ENST00000421291 307 ntBASIC0.41□□□□□ -2.34
CCDC18Q5T9S5 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms