Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AC022616.8-201ENST00000533569 253 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AC008088.1-201ENST00000580993 280 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 VN1R107P-201ENST00000601784 209 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AC004908.3-201ENST00000610248 625 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AC108706.1-201ENST00000611053 297 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AC009033.1-201ENST00000624279 431 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AC091895.1-201ENST00000624494 256 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
CCDC58Q4VC31 NACAP2-201ENST00000318548 624 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AC138393.1-203ENST00000327086 343 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 RNU6-112P-201ENST00000363599 104 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 Y_RNA.327-201ENST00000365201 102 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
CCDC58Q4VC31 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AC008267.5-201ENST00000424928 265 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AC004941.2-201ENST00000427009 228 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.62□□□□□ -2.31
CCDC58Q4VC31 MTCO1P57-201ENST00000432182 261 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AC132479.1-201ENST00000449160 144 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.62□□□□□ -2.31
CCDC58Q4VC31 RPL7P43-201ENST00000478876 753 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AL163195.1-201ENST00000496941 348 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 RNU6-760P-201ENST00000516078 97 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 RNU5B-3P-201ENST00000516601 115 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AC025754.2-201ENST00000606491 432 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AC034229.4-201ENST00000607861 441 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 AC008993.2-201ENST00000631744 806 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 OR4G3P-201ENST00000633500 913 ntBASIC0.62□□□□□ -2.31
CCDC58Q4VC31 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
CCDC58Q4VC31 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CCDC58Q4VC31 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CCDC58Q4VC31 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CCDC58Q4VC31 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.61□□□□□ -2.31
CCDC58Q4VC31 RNU6-1005P-201ENST00000384519 107 ntBASIC0.61□□□□□ -2.31
CCDC58Q4VC31 MIR222-201ENST00000384992 110 ntBASIC0.61□□□□□ -2.31
CCDC58Q4VC31 BTF3L4P3-201ENST00000418879 476 ntBASIC0.61□□□□□ -2.31
CCDC58Q4VC31 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.61□□□□□ -2.31
CCDC58Q4VC31 FDX1P2-201ENST00000450769 375 ntBASIC0.61□□□□□ -2.31
CCDC58Q4VC31 AC010460.2-201ENST00000509054 677 ntBASIC0.61□□□□□ -2.31
CCDC58Q4VC31 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.61□□□□□ -2.31
CCDC58Q4VC31 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.61□□□□□ -2.31
CCDC58Q4VC31 MIR3973-201ENST00000579824 107 ntBASIC0.61□□□□□ -2.31
CCDC58Q4VC31 AP000942.3-201ENST00000603702 160 ntBASIC0.61□□□□□ -2.31
CCDC58Q4VC31 AC100821.1-201ENST00000523153 2479 ntBASIC0.61□□□□□ -2.31
CCDC58Q4VC31 MTND4P16-201ENST00000466108 1367 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CCDC58Q4VC31 RNU6-637P-201ENST00000384050 107 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 RPL23AP32-201ENST00000395315 459 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 AC104058.1-201ENST00000448028 297 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC58Q4VC31 RAP1BP2-201ENST00000478270 544 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 AC116655.1-201ENST00000508324 901 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 RNU6-927P-201ENST00000516199 100 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 RNU6-197P-201ENST00000516680 100 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 CYCSP23-201ENST00000519781 313 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC58Q4VC31 MTCO2P2-201ENST00000591258 225 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.6□□□□□ -2.31
CCDC58Q4VC31 AC091057.3-201ENST00000602684 733 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 AC107952.2-201ENST00000606048 486 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 AC012360.2-201ENST00000609349 391 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 AC068205.3-201ENST00000636385 468 ntBASIC0.6□□□□□ -2.31
CCDC58Q4VC31 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CCDC58Q4VC31 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
CCDC58Q4VC31 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 RNU6-392P-201ENST00000364926 101 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 RNU6-1274P-201ENST00000384557 107 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AL117342.1-201ENST00000404861 406 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AL589872.1-201ENST00000426602 288 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 OR6C5P-201ENST00000452388 923 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AL163540.1-201ENST00000485382 386 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 RNU6-113P-201ENST00000516653 101 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AL512310.8-201ENST00000550183 120 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AC136619.2-201ENST00000563361 631 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 MZT1P2-201ENST00000604387 248 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AL139344.1-201ENST00000605228 195 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AC098614.4-201ENST00000607601 462 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AC090970.3-201ENST00000612566 866 ntBASIC0.59□□□□□ -2.31
CCDC58Q4VC31 AC068700.1-201ENST00000565862 3754 ntBASIC0.59□□□□□ -2.32
CCDC58Q4VC31 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.59□□□□□ -2.32
CCDC58Q4VC31 RNU6-1280P-201ENST00000365211 107 ntBASIC0.58□□□□□ -2.32
CCDC58Q4VC31 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
CCDC58Q4VC31 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
CCDC58Q4VC31 MTCO2P31-201ENST00000402702 684 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms