Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.48□□□□□ -2.17
SSX1Q16384 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.48□□□□□ -2.17
SSX1Q16384 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.48□□□□□ -2.17
SSX1Q16384 AC091951.3-201ENST00000504093 246 ntBASIC1.48□□□□□ -2.17
SSX1Q16384 AC107934.1-201ENST00000522215 217 ntBASIC1.48□□□□□ -2.17
SSX1Q16384 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.48□□□□□ -2.17
SSX1Q16384 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.48□□□□□ -2.17
SSX1Q16384 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.48□□□□□ -2.17
SSX1Q16384 NDUFA5P6-201ENST00000542110 379 ntBASIC1.48□□□□□ -2.17
SSX1Q16384 MIR4255-201ENST00000579351 72 ntBASIC1.48□□□□□ -2.17
SSX1Q16384 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.48□□□□□ -2.17
SSX1Q16384 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.48□□□□□ -2.17
SSX1Q16384 RPL30P11-203ENST00000598995 310 ntBASIC1.48□□□□□ -2.17
SSX1Q16384 AL139022.2-201ENST00000606934 443 ntBASIC1.48□□□□□ -2.17
SSX1Q16384 AC096772.1-201ENST00000609146 564 ntBASIC1.48□□□□□ -2.17
SSX1Q16384 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.48□□□□□ -2.17
SSX1Q16384 AC006338.1-201ENST00000618453 749 ntBASIC1.48□□□□□ -2.17
SSX1Q16384 AC091953.2-201ENST00000623979 160 ntBASIC1.48□□□□□ -2.17
SSX1Q16384 AC006927.4-201ENST00000639187 543 ntBASIC1.48□□□□□ -2.17
SSX1Q16384 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SSX1Q16384 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SSX1Q16384 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SSX1Q16384 MTND5P10-201ENST00000603719 1809 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 RNY4P16-201ENST00000364768 94 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 RNU1-57P-201ENST00000384491 166 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 MIR518A2-201ENST00000384966 87 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 SNORA3.2-201ENST00000408221 125 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 MTCO2P23-201ENST00000425216 680 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.47□□□□□ -2.17
SSX1Q16384 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.47□□□□□ -2.17
SSX1Q16384 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.47□□□□□ -2.17
SSX1Q16384 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.47□□□□□ -2.17
SSX1Q16384 KATNBL1P6-201ENST00000453433 915 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.47□□□□□ -2.17
SSX1Q16384 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.47□□□□□ -2.17
SSX1Q16384 RPL38P4-201ENST00000502376 214 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.47□□□□□ -2.17
SSX1Q16384 ANXA2P1-201ENST00000505539 926 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.47□□□□□ -2.17
SSX1Q16384 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.47□□□□□ -2.17
SSX1Q16384 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.47□□□□□ -2.17
SSX1Q16384 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.47□□□□□ -2.17
SSX1Q16384 AC092325.1-201ENST00000566449 554 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
SSX1Q16384 ELOCP5-201ENST00000604924 333 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 AL607023.1-201ENST00000620045 248 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 AC092656.1-203ENST00000624134 423 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 AC110994.2-201ENST00000635481 492 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SSX1Q16384 AC008555.8-201ENST00000623602 2168 ntBASIC1.47□□□□□ -2.17
SSX1Q16384 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SSX1Q16384 RBBP8P1-201ENST00000449447 1844 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 RNU6-858P-201ENST00000362436 107 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 Y_RNA.97-201ENST00000363094 102 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 RNU6-395P-201ENST00000365662 106 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
SSX1Q16384 MTATP6P19-201ENST00000413797 659 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 AL008629.1-201ENST00000438615 184 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 DNAJC19P4-201ENST00000440115 345 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 GDI2P2-201ENST00000445131 608 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.46□□□□□ -2.18
SSX1Q16384 AL583843.1-201ENST00000456070 346 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.46□□□□□ -2.18
SSX1Q16384 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.46□□□□□ -2.18
SSX1Q16384 MED28P2-201ENST00000475771 317 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 AC119751.4-201ENST00000507498 357 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SSX1Q16384 AC008549.1-201ENST00000512900 643 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 RNU2-10P-201ENST00000516375 211 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 Y_RNA.689-201ENST00000516589 107 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 EEF1A1P37-201ENST00000522748 715 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 AP005639.2-201ENST00000527592 928 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 RANP3-201ENST00000530970 276 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.46□□□□□ -2.18
SSX1Q16384 AC098614.4-201ENST00000607601 462 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.46□□□□□ -2.18
SSX1Q16384 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
SSX1Q16384 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
SSX1Q16384 RNU6-1010P-201ENST00000362757 107 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 RNU6-942P-201ENST00000363002 107 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 RNU4-42P-201ENST00000364738 142 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 RNU6-190P-201ENST00000384154 102 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 RNU6-843P-201ENST00000384454 104 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 RNU6-253P-201ENST00000384730 105 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 MIR320A-201ENST00000385302 82 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 SNORA40.19-201ENST00000390846 128 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SSX1Q16384 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SSX1Q16384 AC009518.2-201ENST00000418056 731 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 AL365338.1-201ENST00000422282 858 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 AL022400.1-201ENST00000423946 935 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 HSPE1P21-201ENST00000438283 308 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 MTND6P13-201ENST00000443510 523 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.45□□□□□ -2.18
SSX1Q16384 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.45□□□□□ -2.18
SSX1Q16384 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.45□□□□□ -2.18
SSX1Q16384 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.45□□□□□ -2.18
SSX1Q16384 AC109329.1-201ENST00000518744 317 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 AP003122.4-201ENST00000530980 758 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms