Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 PIGFP3-201ENST00000441918 722 ntBASIC4.07□□□□□ -1.76
VPS72Q15906 GAPDHP27-201ENST00000447427 1020 ntBASIC4.07□□□□□ -1.76
VPS72Q15906 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS72Q15906 Y_RNA.639-201ENST00000458981 102 ntBASIC4.07□□□□□ -1.76
VPS72Q15906 AC117440.1-201ENST00000474107 571 ntBASIC4.07□□□□□ -1.76
VPS72Q15906 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS72Q15906 AC108078.2-201ENST00000510750 236 ntBASIC4.07□□□□□ -1.76
VPS72Q15906 SNORD59.2-201ENST00000516873 68 ntBASIC4.07□□□□□ -1.76
VPS72Q15906 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS72Q15906 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS72Q15906 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS72Q15906 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS72Q15906 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS72Q15906 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS72Q15906 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
VPS72Q15906 AP000942.4-201ENST00000604811 241 ntBASIC4.07□□□□□ -1.76
VPS72Q15906 Z82243.1-201ENST00000609432 473 ntBASIC4.07□□□□□ -1.76
VPS72Q15906 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS72Q15906 AC004696.1-201ENST00000614345 607 ntBASIC4.07□□□□□ -1.76
VPS72Q15906 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS72Q15906 AC243829.7-201ENST00000633081 225 ntBASIC4.07□□□□□ -1.76
VPS72Q15906 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS72Q15906 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS72Q15906 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS72Q15906 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS72Q15906 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS72Q15906 AL049641.1-201ENST00000441055 1948 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 Y_RNA.216-201ENST00000364205 93 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 RNU6-738P-201ENST00000384531 106 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 MIR559-201ENST00000385188 96 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 VN1R36P-201ENST00000414936 291 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS72Q15906 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS72Q15906 AC128713.1-201ENST00000471495 306 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 RPS4XP22-201ENST00000480755 780 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 AC005741.1-201ENST00000511094 432 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.06□□□□□ -1.76
VPS72Q15906 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS72Q15906 AP000889.2-201ENST00000532684 490 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 ELOCP31-201ENST00000540463 467 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS72Q15906 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS72Q15906 AC080078.3-201ENST00000605407 463 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 AL138880.2-201ENST00000616214 239 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 AL590808.1-201ENST00000618696 141 ntBASIC4.06□□□□□ -1.76
VPS72Q15906 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS72Q15906 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS72Q15906 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
VPS72Q15906 AC121333.1-201ENST00000567488 2709 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS72Q15906 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS72Q15906 MIR504-201ENST00000385065 83 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 RNU6-550P-201ENST00000391057 101 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 RNY4P36-201ENST00000391116 96 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 MIR887-201ENST00000401258 79 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 MIR548K-201ENST00000408406 116 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 RNU4-46P-201ENST00000410818 138 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 RNU6-1304P-201ENST00000411374 106 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 RPL30P2-201ENST00000414021 291 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 AL356968.1-201ENST00000416622 474 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS72Q15906 HMGB1P27-201ENST00000431429 603 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS72Q15906 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS72Q15906 AC107399.1-201ENST00000451226 265 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 Y_RNA.631-201ENST00000459607 101 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 AP002884.2-201ENST00000471647 395 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 AC006504.6-201ENST00000590142 199 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 AC092747.3-201ENST00000603769 301 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 SNRPGP17-201ENST00000603780 214 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 HSPE1P7-201ENST00000604681 321 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 HMGB1P50-201ENST00000605814 607 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 AC040896.1-201ENST00000613819 479 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 AL589994.2-201ENST00000621124 579 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 AC073308.1-201ENST00000623696 305 ntBASIC4.05□□□□□ -1.76
VPS72Q15906 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS72Q15906 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS72Q15906 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS72Q15906 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS72Q15906 FAM35DP-201ENST00000323387 2712 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS72Q15906 SNORD113-7-201ENST00000363762 77 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 RNU6-82P-201ENST00000363970 107 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 SNORA63C-201ENST00000364578 129 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 POLHP1-201ENST00000411806 470 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS72Q15906 AC003685.2-201ENST00000422795 395 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 RAC1P6-201ENST00000423911 575 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 GPM6BP2-201ENST00000432046 144 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 GPM6BP1-201ENST00000446387 144 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS72Q15906 AL031183.1-201ENST00000457667 207 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 AC092798.1-201ENST00000458542 409 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 AC130509.1-201ENST00000464158 433 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 RPS20P22-201ENST00000473700 357 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS72Q15906 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS72Q15906 RBBP4P6-201ENST00000508098 202 ntBASIC4.04□□□□□ -1.76
VPS72Q15906 AC098591.2-201ENST00000510152 315 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms