Protein–RNA interactions for Protein: Q15459

SF3A1, Splicing factor 3A subunit 1, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1Q15459 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.19□□□□□ -1.74
SF3A1Q15459 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SF3A1Q15459 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SF3A1Q15459 ZNF826P-207ENST00000622273 1910 ntBASIC4.19□□□□□ -1.74
SF3A1Q15459 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.19□□□□□ -1.74
SF3A1Q15459 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.18□□□□□ -1.74
SF3A1Q15459 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.18□□□□□ -1.74
SF3A1Q15459 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.18□□□□□ -1.74
SF3A1Q15459 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SF3A1Q15459 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SF3A1Q15459 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SF3A1Q15459 RNU6-105P-201ENST00000363909 104 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
SF3A1Q15459 Y_RNA.384-201ENST00000383909 102 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 MIR200C-201ENST00000384980 68 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 RNU6ATAC-201ENST00000408749 126 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 RN7SKP158-201ENST00000410453 326 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 RNU6-1245P-201ENST00000411130 106 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 RNU6-325P-201ENST00000411132 105 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 AL030996.1-201ENST00000411430 235 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 RPL21P23-201ENST00000446654 460 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.18□□□□□ -1.74
SF3A1Q15459 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.18□□□□□ -1.74
SF3A1Q15459 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.18□□□□□ -1.74
SF3A1Q15459 AC007991.1-201ENST00000522680 631 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 AC093027.1-201ENST00000546698 429 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 AL355375.2-201ENST00000574825 175 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.18□□□□□ -1.74
SF3A1Q15459 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.18□□□□□ -1.74
SF3A1Q15459 AC113139.1-201ENST00000605049 239 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 AC002064.3-201ENST00000623448 346 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SF3A1Q15459 MIR3529-201ENST00000637713 78 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 AC091564.4-201ENST00000533934 2194 ntBASIC4.18□□□□□ -1.74
SF3A1Q15459 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SF3A1Q15459 GABRG2-229ENST00000641017 3628 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.17□□□□□ -1.74
SF3A1Q15459 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.17□□□□□ -1.74
SF3A1Q15459 MFSD8-236ENST00000641509 4050 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 MTND4P23-201ENST00000447723 1363 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SF3A1Q15459 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SF3A1Q15459 SNORD62.1-201ENST00000362541 86 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 Y_RNA.151-201ENST00000363566 112 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 RNA5SP42-201ENST00000364278 115 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 RNU6-601P-201ENST00000384540 107 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.17□□□□□ -1.74
SF3A1Q15459 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.17□□□□□ -1.74
SF3A1Q15459 AC002075.2-201ENST00000425207 252 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 RPS29P31-201ENST00000446147 164 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 PCMTD1P1-201ENST00000455560 355 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 U8.21-201ENST00000459536 136 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 RPS29P12-201ENST00000460178 152 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 AL133162.1-201ENST00000463228 453 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.17□□□□□ -1.74
SF3A1Q15459 FGF7P4-201ENST00000509595 295 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 RNU6-1231P-201ENST00000517185 103 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.17□□□□□ -1.74
SF3A1Q15459 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.17□□□□□ -1.74
SF3A1Q15459 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.17□□□□□ -1.74
SF3A1Q15459 AC005476.1-201ENST00000554427 397 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.17□□□□□ -1.74
SF3A1Q15459 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.17□□□□□ -1.74
SF3A1Q15459 MIR5187-201ENST00000583479 76 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 MIR4795-201ENST00000584182 89 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 AC016727.1-205ENST00000605437 569 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.17□□□□□ -1.74
SF3A1Q15459 AC019193.3-201ENST00000609144 554 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 AL161423.1-201ENST00000613700 262 ntBASIC4.17□□□□□ -1.74
SF3A1Q15459 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SF3A1Q15459 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SF3A1Q15459 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SF3A1Q15459 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.16□□□□□ -1.74
SF3A1Q15459 RPL9P7-201ENST00000330965 580 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 RNU6-1317P-201ENST00000364582 104 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 Y_RNA.339-201ENST00000365325 102 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 RNU6-748P-201ENST00000384648 107 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 MIR517A-201ENST00000385001 87 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 RN7SKP156-201ENST00000410308 342 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.16□□□□□ -1.74
SF3A1Q15459 AL513043.1-201ENST00000439124 535 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SF3A1Q15459 AC013470.1-201ENST00000453438 462 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 RPL9P9-202ENST00000466501 579 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 MRPS36P2-201ENST00000512569 299 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 RNU6-277P-201ENST00000516272 106 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.16□□□□□ -1.74
SF3A1Q15459 CR383656.8-201ENST00000549046 145 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.16□□□□□ -1.74
SF3A1Q15459 POLR3GP2-201ENST00000588366 668 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 AL133393.1-201ENST00000603277 287 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 AC006077.1-201ENST00000604746 343 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 AC107294.3-201ENST00000609211 526 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 AC090617.7-201ENST00000623952 126 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 AL359697.1-201ENST00000624879 587 ntBASIC4.16□□□□□ -1.74
SF3A1Q15459 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.16□□□□□ -1.74
SF3A1Q15459 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SF3A1Q15459 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SF3A1Q15459 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
SF3A1Q15459 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms