Protein–RNA interactions for Protein: Q13011

ECH1, Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1Q13011 AL021397.1-201ENST00000451806 248 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.83□□□□□ -2.12
ECH1Q13011 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.83□□□□□ -2.12
ECH1Q13011 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.83□□□□□ -2.12
ECH1Q13011 AP000797.1-201ENST00000478870 387 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 AC140059.1-201ENST00000489238 361 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.83□□□□□ -2.12
ECH1Q13011 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.83□□□□□ -2.12
ECH1Q13011 AL512310.1-201ENST00000548639 172 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 OR11H5P-201ENST00000554039 926 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 AC233702.2-202ENST00000562547 291 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 AC136619.2-201ENST00000563361 631 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.83□□□□□ -2.12
ECH1Q13011 MIR1273D-201ENST00000577266 86 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 AL359999.1-201ENST00000604513 294 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 AL355297.2-201ENST00000604792 129 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 AL451064.1-201ENST00000607718 471 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 AC004223.4-201ENST00000612426 332 ntBASIC1.83□□□□□ -2.12
ECH1Q13011 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
ECH1Q13011 XGY1-201ENST00000381172 446 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 SNORA46.1-201ENST00000391069 153 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.82□□□□□ -2.12
ECH1Q13011 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.82□□□□□ -2.12
ECH1Q13011 DPH3P2-201ENST00000422618 250 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AL160275.3-201ENST00000423876 471 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.82□□□□□ -2.12
ECH1Q13011 AIMP1P2-201ENST00000425294 312 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AL356583.2-201ENST00000426536 280 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.82□□□□□ -2.12
ECH1Q13011 AL161788.1-201ENST00000441805 169 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.82□□□□□ -2.12
ECH1Q13011 AL591719.1-201ENST00000444669 744 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 RPL23AP7-203ENST00000449021 469 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.82□□□□□ -2.12
ECH1Q13011 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.82□□□□□ -2.12
ECH1Q13011 AC018868.1-201ENST00000491307 315 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.82□□□□□ -2.12
ECH1Q13011 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.82□□□□□ -2.12
ECH1Q13011 AC112206.3-201ENST00000514578 389 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
ECH1Q13011 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.82□□□□□ -2.12
ECH1Q13011 AC022878.1-201ENST00000530684 149 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AC009094.1-201ENST00000564443 426 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.82□□□□□ -2.12
ECH1Q13011 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ECH1Q13011 AC009314.1-201ENST00000603871 304 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 NDUFA8P1-201ENST00000605525 367 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AC022202.1-201ENST00000613515 211 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AL359547.2-201ENST00000615810 418 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.82□□□□□ -2.12
ECH1Q13011 AC092656.1-203ENST00000624134 423 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AC017037.3-201ENST00000625016 472 ntBASIC1.82□□□□□ -2.12
ECH1Q13011 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.82□□□□□ -2.12
ECH1Q13011 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.82□□□□□ -2.12
ECH1Q13011 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.82□□□□□ -2.12
ECH1Q13011 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ECH1Q13011 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.82□□□□□ -2.12
ECH1Q13011 AC092881.1-201ENST00000638218 2733 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 AC138393.1-203ENST00000327086 343 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ECH1Q13011 Y_RNA.22-201ENST00000362492 102 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 RNU5E-5P-201ENST00000365379 116 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 MIR558-201ENST00000384920 94 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ECH1Q13011 RNU2-63P-201ENST00000410792 194 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 EDDM3CP-201ENST00000415977 425 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 AC008267.5-201ENST00000424928 265 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.81□□□□□ -2.12
ECH1Q13011 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.81□□□□□ -2.12
ECH1Q13011 NDUFB1P2-201ENST00000449477 176 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 FABP5P13-201ENST00000452144 328 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 AC055731.1-201ENST00000474387 401 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 MED28P2-201ENST00000475771 317 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 AC005178.1-201ENST00000508392 440 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 SNORA3.4-201ENST00000515969 96 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 RNU2-44P-201ENST00000516795 194 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.81□□□□□ -2.12
ECH1Q13011 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.81□□□□□ -2.12
ECH1Q13011 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.81□□□□□ -2.12
ECH1Q13011 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.81□□□□□ -2.12
ECH1Q13011 FAM92A1P1-201ENST00000528023 890 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.81□□□□□ -2.12
ECH1Q13011 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.81□□□□□ -2.12
ECH1Q13011 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.81□□□□□ -2.12
ECH1Q13011 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
ECH1Q13011 AC112191.3-201ENST00000604371 277 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 AL022161.1-201ENST00000604390 213 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 AC018638.7-201ENST00000605836 1114 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.81□□□□□ -2.12
ECH1Q13011 AC091304.9-201ENST00000612091 226 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 AC012409.4-201ENST00000612923 249 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 MIR219B-201ENST00000637023 88 ntBASIC1.81□□□□□ -2.12
ECH1Q13011 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ECH1Q13011 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.8□□□□□ -2.12
ECH1Q13011 RBBP8P1-201ENST00000449447 1844 ntBASIC1.8□□□□□ -2.12
ECH1Q13011 MIR412-201ENST00000362142 91 ntBASIC1.8□□□□□ -2.12
ECH1Q13011 SNORD14B-201ENST00000364533 90 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms