Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNU6-976P-201ENST00000516086 111 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 RNU6-307P-201ENST00000516743 106 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 Y_RNA.711-201ENST00000516993 102 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.09□□□□□ -1.75
SSRP1Q08945 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.09□□□□□ -1.75
SSRP1Q08945 AC109446.1-201ENST00000566172 220 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSRP1Q08945 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.09□□□□□ -1.75
SSRP1Q08945 AC008962.1-201ENST00000605729 304 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 AC039056.2-201ENST00000622261 511 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 uc_338.22-201ENST00000622722 187 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 AC138627.2-201ENST00000624202 601 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 AC092608.2-201ENST00000624427 218 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.09□□□□□ -1.75
SSRP1Q08945 AF127577.6-201ENST00000623352 2191 ntBASIC4.09□□□□□ -1.76
SSRP1Q08945 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSRP1Q08945 AL161912.2-201ENST00000565707 3007 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSRP1Q08945 Y_RNA.162-201ENST00000363683 102 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SSRP1Q08945 RNU6-842P-201ENST00000384269 107 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 MIR518D-201ENST00000385014 87 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSRP1Q08945 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AP000567.1-201ENST00000406413 156 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 MTND5P7-201ENST00000413558 1798 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.08□□□□□ -1.76
SSRP1Q08945 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.08□□□□□ -1.76
SSRP1Q08945 AC098831.1-201ENST00000440661 216 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 HIGD1AP2-201ENST00000446367 280 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AL133547.1-201ENST00000448546 220 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 RPL26P9-201ENST00000457466 433 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 U8.21-201ENST00000459536 136 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AC008571.1-201ENST00000467232 300 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 SNRPGP3-201ENST00000469405 227 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 RPS27AP10-201ENST00000496103 208 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AK3P2-201ENST00000507976 429 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 PTP4A1P4-201ENST00000512479 322 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 RNU6-377P-201ENST00000515965 102 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AP004607.1-201ENST00000524456 203 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AC103996.1-201ENST00000555468 102 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.08□□□□□ -1.76
SSRP1Q08945 CPDP1-201ENST00000579660 283 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AC005899.2-201ENST00000584353 90 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.08□□□□□ -1.76
SSRP1Q08945 PART1_1.1-201ENST00000611761 217 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AC011890.2-201ENST00000613393 294 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AC004852.3-201ENST00000614131 326 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AC022149.2-201ENST00000621061 203 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 PLCE1P1-201ENST00000622094 305 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 U4.7-201ENST00000638126 106 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AC009093.8-201ENST00000641769 292 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSRP1Q08945 OTUD4P1-201ENST00000237841 3067 ntBASIC4.08□□□□□ -1.76
SSRP1Q08945 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.08□□□□□ -1.76
SSRP1Q08945 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSRP1Q08945 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.07□□□□□ -1.76
SSRP1Q08945 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
SSRP1Q08945 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.07□□□□□ -1.76
SSRP1Q08945 RPL9P7-201ENST00000330965 580 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 RNU6-78P-201ENST00000362897 107 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 Y_RNA.112-201ENST00000363250 102 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 Y_RNA.202-201ENST00000364083 110 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 RNU6-596P-201ENST00000365395 98 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 RNU6-898P-201ENST00000365627 104 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SSRP1Q08945 RNU6-692P-201ENST00000384496 107 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 AL513475.1-201ENST00000406602 315 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 RPL23AP82-202ENST00000427528 469 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 AL513043.1-201ENST00000439124 535 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.07□□□□□ -1.76
SSRP1Q08945 AL137792.2-201ENST00000443484 235 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.07□□□□□ -1.76
SSRP1Q08945 AC006026.2-201ENST00000457376 180 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 RPL9P9-202ENST00000466501 579 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 AC106707.2-201ENST00000484182 374 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.07□□□□□ -1.76
SSRP1Q08945 SMURF2P1-201ENST00000514992 481 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 ACA59.1-201ENST00000515966 143 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 AC022634.1-201ENST00000520765 532 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.07□□□□□ -1.76
SSRP1Q08945 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.07□□□□□ -1.76
SSRP1Q08945 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.07□□□□□ -1.76
SSRP1Q08945 NACAP3-201ENST00000552100 481 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.07□□□□□ -1.76
SSRP1Q08945 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.07□□□□□ -1.76
SSRP1Q08945 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.07□□□□□ -1.76
SSRP1Q08945 AC018889.1-201ENST00000605372 397 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 AC012442.3-202ENST00000636742 206 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSRP1Q08945 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
SSRP1Q08945 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSRP1Q08945 MFSD8-233ENST00000641482 4860 ntBASIC4.07□□□□□ -1.76
SSRP1Q08945 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSRP1Q08945 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SSRP1Q08945 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSRP1Q08945 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSRP1Q08945 RNU6-1115P-201ENST00000362490 106 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 RNU6-1317P-201ENST00000364582 104 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 546.1 ms