Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN1BQ07699 IFNA11P-201ENST00000446352 526 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.45□□□□□ -2.02
SCN1BQ07699 AL671855.1-201ENST00000446875 1203 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC132479.1-201ENST00000449160 144 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC003982.1-202ENST00000469928 248 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AP001025.1-201ENST00000486139 332 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 SRIP1-201ENST00000489235 288 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.45□□□□□ -2.02
SCN1BQ07699 AC092436.1-201ENST00000506450 503 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC074344.1-201ENST00000512823 224 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 SNORA31.23-201ENST00000517219 133 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 LRRC37A5P-203ENST00000580181 585 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC073648.5-201ENST00000603502 305 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC025449.1-201ENST00000603896 529 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AL355297.2-201ENST00000604792 129 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC008536.2-201ENST00000607284 349 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 MIR92B-201ENST00000607575 96 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC091834.1-201ENST00000614543 472 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC090582.1-201ENST00000636321 199 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC000403.1-201ENST00000613696 3585 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SCN1BQ07699 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SCN1BQ07699 MIR422A-201ENST00000362286 90 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 RNU6-1010P-201ENST00000362757 107 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 RNU6-78P-201ENST00000362897 107 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 RNA5SP374-201ENST00000362939 125 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 SNORA3A-201ENST00000364113 130 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 SNORA9.2-201ENST00000365361 133 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 RNU6-1032P-201ENST00000384100 107 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 RNU6-622P-201ENST00000384272 103 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 MIR186-201ENST00000384988 86 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 RPS4XP7-201ENST00000406274 780 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN1BQ07699 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN1BQ07699 AL118520.1-201ENST00000450770 291 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN1BQ07699 RPL31P3-201ENST00000458430 332 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 MTCO3P9-201ENST00000506989 781 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 AC104136.1-201ENST00000512969 394 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.44□□□□□ -2.02
SCN1BQ07699 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN1BQ07699 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.44□□□□□ -2.02
SCN1BQ07699 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 AC006362.1-201ENST00000567392 174 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 AC090897.2-201ENST00000581715 130 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN1BQ07699 RPL30P11-203ENST00000598995 310 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 AC104237.2-201ENST00000612456 443 ntBASIC2.44□□□□□ -2.02
SCN1BQ07699 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN1BQ07699 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SCN1BQ07699 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCN1BQ07699 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCN1BQ07699 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCN1BQ07699 AC092593.1-201ENST00000515413 1815 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SCN1BQ07699 SNORD56.1-201ENST00000362913 68 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 RNU5E-7P-201ENST00000365290 117 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 Y_RNA.359-201ENST00000365498 102 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.43□□□□□ -2.02
SCN1BQ07699 RNU6-606P-201ENST00000384721 111 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.43□□□□□ -2.02
SCN1BQ07699 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.43□□□□□ -2.02
SCN1BQ07699 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.43□□□□□ -2.02
SCN1BQ07699 MTATP6P18-201ENST00000417994 673 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.43□□□□□ -2.02
SCN1BQ07699 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.43□□□□□ -2.02
SCN1BQ07699 CR769767.1-201ENST00000436337 346 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.43□□□□□ -2.02
SCN1BQ07699 AL360221.1-201ENST00000445989 335 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.43□□□□□ -2.02
SCN1BQ07699 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 CYP2C59P-201ENST00000457790 269 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.43□□□□□ -2.02
SCN1BQ07699 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 AC093249.1-201ENST00000567049 203 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 AC105137.2-201ENST00000569073 466 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 AC010620.1-201ENST00000601088 1102 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 NDUFA8P1-201ENST00000605525 367 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 U4atac.1-201ENST00000618345 95 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 AC136475.10-201ENST00000620253 385 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 RMST_7.1-201ENST00000621935 268 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 AL031601.2-202ENST00000622650 282 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 AC004777.1-201ENST00000624317 287 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SCN1BQ07699 ZNF680P1-201ENST00000436625 1469 ntBASIC2.43□□□□□ -2.02
SCN1BQ07699 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCN1BQ07699 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
SCN1BQ07699 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.42□□□□□ -2.02
SCN1BQ07699 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
SCN1BQ07699 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCN1BQ07699 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCN1BQ07699 Y_RNA.159-201ENST00000363674 87 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 RNU1-91P-201ENST00000364746 163 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 RNA5SP240-201ENST00000365355 128 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 RNU1-148P-201ENST00000384472 162 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 AL138885.1-201ENST00000405921 675 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms