Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC007742.1-201ENST00000425789 329 ntBASIC-0.06□□□□□ -2.42
TFF3Q07654 MTCO1P3-201ENST00000429327 192 ntBASIC-0.06□□□□□ -2.42
TFF3Q07654 ELOCP26-201ENST00000436067 329 ntBASIC-0.06□□□□□ -2.42
TFF3Q07654 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
TFF3Q07654 TRBV8-1-201ENST00000481590 279 ntBASIC-0.06□□□□□ -2.42
TFF3Q07654 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-0.06□□□□□ -2.42
TFF3Q07654 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.06□□□□□ -2.42
TFF3Q07654 AC121161.1-201ENST00000510606 652 ntBASIC-0.06□□□□□ -2.42
TFF3Q07654 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-0.06□□□□□ -2.42
TFF3Q07654 AC090079.2-201ENST00000575289 768 ntBASIC-0.06□□□□□ -2.42
TFF3Q07654 AC026271.5-201ENST00000577873 130 ntBASIC-0.06□□□□□ -2.42
TFF3Q07654 MIR5589-201ENST00000579442 60 ntBASIC-0.06□□□□□ -2.42
TFF3Q07654 OR5AK4P-201ENST00000635912 903 ntBASIC-0.06□□□□□ -2.42
TFF3Q07654 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 MIR605-201ENST00000385078 83 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.07□□□□□ -2.42
TFF3Q07654 RNU2-63P-201ENST00000410792 194 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 OFD1P18Y-201ENST00000420889 959 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 MTCO2P12-201ENST00000427426 682 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 FTH1P12-201ENST00000432137 551 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 AL591704.1-201ENST00000432574 275 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 AC092573.2-201ENST00000434546 243 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 RPL23AP54-201ENST00000495129 419 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 SNORA4.4-201ENST00000515921 135 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC-0.07□□□□□ -2.42
TFF3Q07654 MIR4802-201ENST00000581881 80 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 RAC1P9-201ENST00000604990 392 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 AL357075.2-201ENST00000614906 189 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 AC024581.2-201ENST00000619986 252 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 AC097372.5-201ENST00000623665 376 ntBASIC-0.07□□□□□ -2.42
TFF3Q07654 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.07□□□□□ -2.42
TFF3Q07654 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC-0.08□□□□□ -2.42
TFF3Q07654 RNA5SP361-201ENST00000362686 118 ntBASIC-0.08□□□□□ -2.42
TFF3Q07654 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.08□□□□□ -2.42
TFF3Q07654 RNU4-78P-201ENST00000410940 126 ntBASIC-0.08□□□□□ -2.42
TFF3Q07654 RPL21P24-201ENST00000413752 448 ntBASIC-0.08□□□□□ -2.42
TFF3Q07654 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.08□□□□□ -2.42
TFF3Q07654 EIF1P1-201ENST00000421436 341 ntBASIC-0.08□□□□□ -2.42
TFF3Q07654 CETN4P-201ENST00000432407 469 ntBASIC-0.08□□□□□ -2.42
TFF3Q07654 FCF1P6-201ENST00000456841 595 ntBASIC-0.08□□□□□ -2.42
TFF3Q07654 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC-0.08□□□□□ -2.42
TFF3Q07654 SNORA31.22-201ENST00000517204 135 ntBASIC-0.08□□□□□ -2.42
TFF3Q07654 AC090142.3-201ENST00000519012 385 ntBASIC-0.08□□□□□ -2.42
TFF3Q07654 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.08□□□□□ -2.42
TFF3Q07654 AC105129.3-201ENST00000605455 485 ntBASIC-0.08□□□□□ -2.42
TFF3Q07654 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.09□□□□□ -2.42
TFF3Q07654 MIR329-1-201ENST00000385028 80 ntBASIC-0.09□□□□□ -2.42
TFF3Q07654 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.09□□□□□ -2.42
TFF3Q07654 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.09□□□□□ -2.42
TFF3Q07654 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.09□□□□□ -2.42
TFF3Q07654 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.09□□□□□ -2.42
TFF3Q07654 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.09□□□□□ -2.42
TFF3Q07654 AC023050.2-201ENST00000544968 387 ntBASIC-0.09□□□□□ -2.42
TFF3Q07654 AL713866.2-201ENST00000603579 219 ntBASIC-0.09□□□□□ -2.42
TFF3Q07654 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
TFF3Q07654 AL359314.1-201ENST00000616913 261 ntBASIC-0.09□□□□□ -2.42
TFF3Q07654 RNU6-666P-201ENST00000363499 107 ntBASIC-0.1□□□□□ -2.43
TFF3Q07654 SNORA4.3-201ENST00000365564 137 ntBASIC-0.1□□□□□ -2.43
TFF3Q07654 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.1□□□□□ -2.43
TFF3Q07654 C1DP1-201ENST00000426049 402 ntBASIC-0.1□□□□□ -2.43
TFF3Q07654 AC010631.1-201ENST00000474150 156 ntBASIC-0.1□□□□□ -2.43
TFF3Q07654 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC-0.1□□□□□ -2.43
TFF3Q07654 AC147055.4-201ENST00000504399 745 ntBASIC-0.1□□□□□ -2.43
TFF3Q07654 RN7SKP12-201ENST00000516275 143 ntBASIC-0.1□□□□□ -2.43
TFF3Q07654 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.1□□□□□ -2.43
TFF3Q07654 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC-0.1□□□□□ -2.43
TFF3Q07654 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC-0.1□□□□□ -2.43
TFF3Q07654 AC090330.1-201ENST00000588646 764 ntBASIC-0.1□□□□□ -2.43
TFF3Q07654 AC096586.2-201ENST00000610260 441 ntBASIC-0.1□□□□□ -2.43
TFF3Q07654 AL589743.7-201ENST00000612637 233 ntBASIC-0.1□□□□□ -2.43
TFF3Q07654 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.1□□□□□ -2.43
TFF3Q07654 AC106858.1-201ENST00000637497 429 ntBASIC-0.1□□□□□ -2.43
TFF3Q07654 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.1□□□□□ -2.43
TFF3Q07654 AL136372.1-201ENST00000403060 228 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 RNA5SP100-201ENST00000410903 110 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 RNA5SP59-201ENST00000410922 110 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 RNA5SP501-201ENST00000410990 112 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 RPS3AP1-201ENST00000413190 320 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 MTCO2P20-201ENST00000437339 673 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 HSPE1P13-201ENST00000451143 297 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.11□□□□□ -2.43
TFF3Q07654 RPS26P45-201ENST00000471748 340 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 AC011406.1-201ENST00000512440 370 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC-0.11□□□□□ -2.43
TFF3Q07654 HAUS1P3-201ENST00000523909 662 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC-0.11□□□□□ -2.43
TFF3Q07654 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC-0.11□□□□□ -2.43
TFF3Q07654 AC022432.1-201ENST00000595739 310 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 LARP7P1-201ENST00000605576 316 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 AC009233.1-201ENST00000616477 371 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 AC073349.3-201ENST00000617616 186 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.11□□□□□ -2.43
TFF3Q07654 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.12□□□□□ -2.43
TFF3Q07654 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.12□□□□□ -2.43
TFF3Q07654 RNU6-923P-201ENST00000364753 107 ntBASIC-0.12□□□□□ -2.43
TFF3Q07654 RNU6-1074P-201ENST00000383995 104 ntBASIC-0.12□□□□□ -2.43
TFF3Q07654 MIR29C-201ENST00000385231 88 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms