Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AC022861.1-201ENST00000522981 663 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.69□□□□□ -2.3
HIST1H1AQ02539 CBX3P8-201ENST00000532412 525 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.69□□□□□ -2.3
HIST1H1AQ02539 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AC136619.2-201ENST00000563361 631 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AC079148.1-201ENST00000565944 819 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AC093249.1-201ENST00000567049 203 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AL391646.1-201ENST00000603860 190 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AL020996.3-201ENST00000606617 222 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 snoU13.31-201ENST00000607291 104 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AC098614.4-201ENST00000607601 462 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AL355802.4-201ENST00000607635 548 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
HIST1H1AQ02539 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
HIST1H1AQ02539 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 RNU6-53P-201ENST00000365367 106 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
HIST1H1AQ02539 RNU6-754P-201ENST00000391166 107 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC008267.5-201ENST00000424928 265 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 GPM6BP2-201ENST00000432046 144 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC245047.4-201ENST00000433189 144 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC234064.1-201ENST00000436312 247 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 GPM6BP1-201ENST00000446387 144 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 RPS27P1-201ENST00000450552 247 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 FABP5P15-201ENST00000453566 214 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.68□□□□□ -2.3
HIST1H1AQ02539 RPL9P9-202ENST00000466501 579 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 RPL26P26-201ENST00000480251 434 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC108078.1-201ENST00000508073 725 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC110760.3-202ENST00000515177 371 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC103833.1-201ENST00000517442 172 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.68□□□□□ -2.3
HIST1H1AQ02539 MIR3937-201ENST00000580135 106 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 MIR4769-201ENST00000584126 77 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC098848.2-201ENST00000588023 330 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AL161798.1-201ENST00000604630 131 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AP000860.1-201ENST00000605250 559 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC107952.2-201ENST00000606048 486 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 MIR1264-201ENST00000616374 69 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 MIR8065-201ENST00000620577 100 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 AC009268.2-201ENST00000621925 457 ntBASIC0.68□□□□□ -2.3
HIST1H1AQ02539 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
HIST1H1AQ02539 RNU6-28P-201ENST00000362378 107 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 RNU6-23P-201ENST00000363283 107 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 SUGT1P1-201ENST00000379514 476 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 Y_RNA.548-201ENST00000384656 105 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 AC119751.3-201ENST00000399720 670 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 AC069282.1-201ENST00000411911 526 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 UBE2V1P8-201ENST00000437166 265 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 AC244505.5-201ENST00000443639 207 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 RPL39P6-201ENST00000448289 150 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 RPL23AP35-201ENST00000451906 501 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.67□□□□□ -2.3
HIST1H1AQ02539 snoU13.8-201ENST00000458890 104 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 RPS3AP22-201ENST00000488297 769 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 RNU6-1183P-201ENST00000517054 60 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 MIR4637-201ENST00000582405 84 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 AL589994.2-201ENST00000621124 579 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 AC019226.1-201ENST00000625666 515 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.67□□□□□ -2.3
HIST1H1AQ02539 AC008993.2-201ENST00000631744 806 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 DDX43P2-201ENST00000604753 1354 ntBASIC0.67□□□□□ -2.3
HIST1H1AQ02539 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.66□□□□□ -2.3
HIST1H1AQ02539 HSBP1P2-201ENST00000299671 229 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 RNU6-1066P-201ENST00000363573 105 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 SNORD114-2-201ENST00000363953 78 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 RNU6-359P-201ENST00000365466 108 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 RNU6-1065P-201ENST00000384513 106 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 MIR217-201ENST00000384817 110 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
HIST1H1AQ02539 SNORD65C-201ENST00000390962 71 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 AL590084.2-201ENST00000401481 382 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 AL133475.1-201ENST00000404414 305 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 Y_RNA.595-201ENST00000410403 105 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 PIGFP2-201ENST00000421400 651 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 ISCA1P1-201ENST00000426679 387 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 Z82205.1-201ENST00000428456 297 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.66□□□□□ -2.3
HIST1H1AQ02539 FTH1P12-201ENST00000432137 551 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 RPL30P1-201ENST00000488676 339 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.66□□□□□ -2.3
HIST1H1AQ02539 CYP3A52P-201ENST00000563326 91 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.66□□□□□ -2.3
HIST1H1AQ02539 AC073410.2-201ENST00000603240 332 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 AC211469.2-201ENST00000605461 205 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 AC112220.3-201ENST00000605502 502 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 AL390208.1-201ENST00000605885 644 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 Z82243.1-201ENST00000609432 473 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 AL021879.1-201ENST00000611756 288 ntBASIC0.66□□□□□ -2.3
HIST1H1AQ02539 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.66□□□□□ -2.3
HIST1H1AQ02539 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.66□□□□□ -2.3
HIST1H1AQ02539 AC084824.4-201ENST00000620106 731 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms