Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC008121.1-201ENST00000603244 268 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-6P-201ENST00000606623 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAE1P78406 AL627309.6-201ENST00000606857 840 ntBASIC3.16□□□□□ -1.9
RAE1P78406 AC064836.2-201ENST00000609491 462 ntBASIC3.16□□□□□ -1.9
RAE1P78406 AL161423.1-201ENST00000613700 262 ntBASIC3.16□□□□□ -1.9
RAE1P78406 AL161629.2-201ENST00000615347 275 ntBASIC3.16□□□□□ -1.9
RAE1P78406 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.16□□□□□ -1.9
RAE1P78406 XIST_intron.1-201ENST00000619444 68 ntBASIC3.16□□□□□ -1.9
RAE1P78406 AC099654.10-201ENST00000640395 161 ntBASIC3.16□□□□□ -1.9
RAE1P78406 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAE1P78406 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAE1P78406 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAE1P78406 AC091152.2-201ENST00000591628 2569 ntBASIC3.15□□□□□ -1.9
RAE1P78406 MTND5P7-201ENST00000413558 1798 ntBASIC3.15□□□□□ -1.9
RAE1P78406 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.15□□□□□ -1.9
RAE1P78406 RNA5SP119-201ENST00000362715 117 ntBASIC3.15□□□□□ -1.91
RAE1P78406 Y_RNA.394-201ENST00000383942 103 ntBASIC3.15□□□□□ -1.91
RAE1P78406 RNU6-72P-201ENST00000384285 79 ntBASIC3.15□□□□□ -1.91
RAE1P78406 MIR490-201ENST00000384865 128 ntBASIC3.15□□□□□ -1.91
RAE1P78406 MIR1302-11-201ENST00000408051 138 ntBASIC3.15□□□□□ -1.91
RAE1P78406 MIR1302-9-201ENST00000408365 138 ntBASIC3.15□□□□□ -1.91
RAE1P78406 MIR1302-10-201ENST00000408734 138 ntBASIC3.15□□□□□ -1.91
RAE1P78406 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
RAE1P78406 RPS29P4-201ENST00000414733 161 ntBASIC3.15□□□□□ -1.91
RAE1P78406 HMGN2P31-201ENST00000432430 273 ntBASIC3.15□□□□□ -1.91
RAE1P78406 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.15□□□□□ -1.91
RAE1P78406 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.15□□□□□ -1.91
RAE1P78406 RNU7-187P-201ENST00000458985 68 ntBASIC3.15□□□□□ -1.91
RAE1P78406 RPL23AP45-201ENST00000476406 468 ntBASIC3.15□□□□□ -1.91
RAE1P78406 RPS27AP10-201ENST00000496103 208 ntBASIC3.15□□□□□ -1.91
RAE1P78406 RNU1-143P-201ENST00000516296 146 ntBASIC3.15□□□□□ -1.91
RAE1P78406 Y_RNA.687-201ENST00000516558 91 ntBASIC3.15□□□□□ -1.91
RAE1P78406 AC109479.2-201ENST00000517842 174 ntBASIC3.15□□□□□ -1.91
RAE1P78406 IGKV2-23-201ENST00000518729 323 ntBASIC3.15□□□□□ -1.91
RAE1P78406 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RAE1P78406 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.15□□□□□ -1.91
RAE1P78406 AL391261.3-201ENST00000557194 520 ntBASIC3.15□□□□□ -1.91
RAE1P78406 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RAE1P78406 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.15□□□□□ -1.91
RAE1P78406 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.15□□□□□ -1.91
RAE1P78406 AL160281.1-201ENST00000605307 311 ntBASIC3.15□□□□□ -1.91
RAE1P78406 MIR1302-2-201ENST00000607096 138 ntBASIC3.15□□□□□ -1.91
RAE1P78406 U1.23-201ENST00000610293 146 ntBASIC3.15□□□□□ -1.91
RAE1P78406 uc_338.1-201ENST00000612113 180 ntBASIC3.15□□□□□ -1.91
RAE1P78406 RNU1-68P-201ENST00000615382 146 ntBASIC3.15□□□□□ -1.91
RAE1P78406 AL138880.2-201ENST00000616214 239 ntBASIC3.15□□□□□ -1.91
RAE1P78406 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
RAE1P78406 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RAE1P78406 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.15□□□□□ -1.91
RAE1P78406 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RAE1P78406 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAE1P78406 AL049781.1-201ENST00000623195 3585 ntBASIC3.14□□□□□ -1.91
RAE1P78406 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RAE1P78406 KPNA2P1-201ENST00000458289 1591 ntBASIC3.14□□□□□ -1.91
RAE1P78406 RNU6-43P-201ENST00000384302 107 ntBASIC3.14□□□□□ -1.91
RAE1P78406 MIR518D-201ENST00000385014 87 ntBASIC3.14□□□□□ -1.91
RAE1P78406 AL117339.3-201ENST00000418733 162 ntBASIC3.14□□□□□ -1.91
RAE1P78406 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.14□□□□□ -1.91
RAE1P78406 MTCO2P12-201ENST00000427426 682 ntBASIC3.14□□□□□ -1.91
RAE1P78406 HIGD1AP11-201ENST00000438361 280 ntBASIC3.14□□□□□ -1.91
RAE1P78406 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.14□□□□□ -1.91
RAE1P78406 SSXP4-201ENST00000451349 245 ntBASIC3.14□□□□□ -1.91
RAE1P78406 RPL26P9-201ENST00000457466 433 ntBASIC3.14□□□□□ -1.91
RAE1P78406 Y_RNA.653-201ENST00000459091 95 ntBASIC3.14□□□□□ -1.91
RAE1P78406 AC128713.1-201ENST00000471495 306 ntBASIC3.14□□□□□ -1.91
RAE1P78406 AC108043.1-201ENST00000512696 574 ntBASIC3.14□□□□□ -1.91
RAE1P78406 AC026782.1-201ENST00000512952 449 ntBASIC3.14□□□□□ -1.91
RAE1P78406 RNU6-1170P-201ENST00000515974 106 ntBASIC3.14□□□□□ -1.91
RAE1P78406 RNU6-1153P-201ENST00000516760 105 ntBASIC3.14□□□□□ -1.91
RAE1P78406 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAE1P78406 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.14□□□□□ -1.91
RAE1P78406 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.14□□□□□ -1.91
RAE1P78406 AC093249.1-201ENST00000567049 203 ntBASIC3.14□□□□□ -1.91
RAE1P78406 MIR5690-201ENST00000583739 73 ntBASIC3.14□□□□□ -1.91
RAE1P78406 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.14□□□□□ -1.91
RAE1P78406 AC124303.1-201ENST00000605703 360 ntBASIC3.14□□□□□ -1.91
RAE1P78406 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.14□□□□□ -1.91
RAE1P78406 AC084781.2-201ENST00000615568 161 ntBASIC3.14□□□□□ -1.91
RAE1P78406 AC007742.2-201ENST00000618226 398 ntBASIC3.14□□□□□ -1.91
RAE1P78406 PLCE1P1-201ENST00000622094 305 ntBASIC3.14□□□□□ -1.91
RAE1P78406 AC073476.4-201ENST00000628409 72 ntBASIC3.14□□□□□ -1.91
RAE1P78406 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.14□□□□□ -1.91
RAE1P78406 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAE1P78406 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.14□□□□□ -1.91
RAE1P78406 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RAE1P78406 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
RAE1P78406 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RAE1P78406 RNU6-1227P-201ENST00000383981 107 ntBASIC3.13□□□□□ -1.91
RAE1P78406 RNU6-306P-201ENST00000384617 107 ntBASIC3.13□□□□□ -1.91
RAE1P78406 RNU6-1106P-201ENST00000390845 107 ntBASIC3.13□□□□□ -1.91
RAE1P78406 Y_RNA.579-201ENST00000390939 94 ntBASIC3.13□□□□□ -1.91
RAE1P78406 U3.37-201ENST00000408528 213 ntBASIC3.13□□□□□ -1.91
RAE1P78406 RNA5SP38-201ENST00000410750 119 ntBASIC3.13□□□□□ -1.91
RAE1P78406 AL030996.1-201ENST00000411430 235 ntBASIC3.13□□□□□ -1.91
RAE1P78406 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.13□□□□□ -1.91
RAE1P78406 AC016831.2-201ENST00000417179 352 ntBASIC3.13□□□□□ -1.91
RAE1P78406 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.13□□□□□ -1.91
RAE1P78406 AC093151.1-201ENST00000427711 313 ntBASIC3.13□□□□□ -1.91
RAE1P78406 CST9LP2-201ENST00000437612 320 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms