Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 GTF2IP12-201ENST00000456547 356 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 MTCYBP16-201ENST00000509187 1129 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 MRPS33P3-201ENST00000513456 322 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.74□□□□□ -2.29
ABCA4P78363 ROCK1P1-201ENST00000573767 549 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.74□□□□□ -2.29
ABCA4P78363 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.74□□□□□ -2.29
ABCA4P78363 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
ABCA4P78363 MIR8074-201ENST00000615081 81 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 Z99571.1-201ENST00000636677 394 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
ABCA4P78363 AC092634.6-201ENST00000418558 192 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 MTND4P24-201ENST00000424002 397 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 SNORA48.9-201ENST00000516419 162 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 AC012414.6-201ENST00000568241 401 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 AP001429.1-201ENST00000602568 530 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 AC239868.4-201ENST00000608318 671 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.73□□□□□ -2.29
ABCA4P78363 AC007435.1-201ENST00000421086 415 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 AL160275.3-201ENST00000423876 471 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 PTGES3P4-201ENST00000426243 356 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 MTCYBP32-201ENST00000427945 1084 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.73□□□□□ -2.29
ABCA4P78363 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA4P78363 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA4P78363 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.73□□□□□ -2.29
ABCA4P78363 AL132857.1-201ENST00000555180 708 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 AC005951.2-201ENST00000576282 495 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 MIR4637-201ENST00000582405 84 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.73□□□□□ -2.29
ABCA4P78363 AL031775.1-201ENST00000607014 887 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 AC126177.8-201ENST00000618339 1015 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 AC024581.2-201ENST00000619986 252 ntBASIC0.73□□□□□ -2.29
ABCA4P78363 MIR330-201ENST00000362196 94 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 Y_RNA.280-201ENST00000364765 112 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AL589655.1-201ENST00000405398 482 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AL590623.1-201ENST00000427864 105 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 MTCO3P5-201ENST00000433620 714 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AL161788.1-201ENST00000441805 169 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AL022238.1-201ENST00000442557 355 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 ARPC3P5-201ENST00000448802 534 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA4P78363 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 UBL5P1-201ENST00000507979 193 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA4P78363 SNORA48.11-201ENST00000517015 89 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.72□□□□□ -2.29
ABCA4P78363 CYB5AP5-201ENST00000549779 389 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 BBIP1P1-201ENST00000602999 279 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AL158211.4-201ENST00000606988 584 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AC010133.1-201ENST00000615809 842 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AC004808.1-201ENST00000627671 721 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA4P78363 RNU6-611P-201ENST00000384276 104 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 MIR30A-201ENST00000385092 71 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
ABCA4P78363 AL592310.1-201ENST00000414330 671 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA4P78363 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCA4P78363 RPL9P9-202ENST00000466501 579 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA4P78363 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA4P78363 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA4P78363 AC023824.3-201ENST00000569003 562 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AL050343.2-201ENST00000607338 280 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 AC092953.2-201ENST00000608000 699 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCA4P78363 AL138713.1-201ENST00000624026 2130 ntBASIC0.72□□□□□ -2.29
ABCA4P78363 Y_RNA.549-201ENST00000384657 102 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 AL139397.2-201ENST00000404529 772 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 RNU2-7P-201ENST00000410794 178 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 AC015922.2-201ENST00000435593 184 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 AL441985.1-201ENST00000457727 251 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 CYP2C59P-201ENST00000457790 269 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 AK3P2-201ENST00000507976 429 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 AC104806.1-201ENST00000508720 308 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.71□□□□□ -2.3
ABCA4P78363 AL355802.3-201ENST00000607571 545 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 AL596245.1-201ENST00000618994 362 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.71□□□□□ -2.3
ABCA4P78363 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
ABCA4P78363 ZNF680P1-201ENST00000436625 1469 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 RNU6-105P-201ENST00000363909 104 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 Y_RNA.255-201ENST00000364581 97 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 USP9YP18-201ENST00000425912 695 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 AC002542.1-201ENST00000440683 193 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.71□□□□□ -2.3
ABCA4P78363 AC112198.4-201ENST00000515450 351 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 AL078604.3-201ENST00000615580 211 ntBASIC0.71□□□□□ -2.3
ABCA4P78363 RNU5E-1-201ENST00000362477 120 ntBASIC0.7□□□□□ -2.3
ABCA4P78363 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.7□□□□□ -2.3
ABCA4P78363 MIR1283-2-201ENST00000408621 87 ntBASIC0.7□□□□□ -2.3
ABCA4P78363 MTCYBP11-201ENST00000447254 1109 ntBASIC0.7□□□□□ -2.3
ABCA4P78363 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.7□□□□□ -2.3
ABCA4P78363 RNU6-581P-201ENST00000516214 105 ntBASIC0.7□□□□□ -2.3
ABCA4P78363 CYCSP27-201ENST00000527643 293 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms