Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AL590240.4-201ENST00000616908 390 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AC010975.3-201ENST00000618727 978 ntBASIC0.72□□□□□ -2.29
LSM3P62310 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AC009268.2-201ENST00000621925 457 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AC022513.1-201ENST00000624512 117 ntBASIC0.72□□□□□ -2.29
LSM3P62310 RNU6-216P-201ENST00000363282 104 ntBASIC0.71□□□□□ -2.3
LSM3P62310 RNU6-414P-201ENST00000363705 104 ntBASIC0.71□□□□□ -2.3
LSM3P62310 RNA5SP493-201ENST00000364115 91 ntBASIC0.71□□□□□ -2.3
LSM3P62310 RNU4-51P-201ENST00000364206 140 ntBASIC0.71□□□□□ -2.3
LSM3P62310 RNU6-432P-201ENST00000384196 109 ntBASIC0.71□□□□□ -2.3
LSM3P62310 MIR515-2-201ENST00000384883 83 ntBASIC0.71□□□□□ -2.3
LSM3P62310 MIR515-1-201ENST00000384884 83 ntBASIC0.71□□□□□ -2.3
LSM3P62310 FTH1P15-201ENST00000406984 280 ntBASIC0.71□□□□□ -2.3
LSM3P62310 RNU4-62P-201ENST00000410125 130 ntBASIC0.71□□□□□ -2.3
LSM3P62310 RN7SKP61-201ENST00000410642 295 ntBASIC0.71□□□□□ -2.3
LSM3P62310 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
LSM3P62310 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.71□□□□□ -2.3
LSM3P62310 AP1B1P2-201ENST00000416196 106 ntBASIC0.71□□□□□ -2.3
LSM3P62310 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.71□□□□□ -2.3
LSM3P62310 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.71□□□□□ -2.3
LSM3P62310 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.71□□□□□ -2.3
LSM3P62310 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.71□□□□□ -2.3
LSM3P62310 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.71□□□□□ -2.3
LSM3P62310 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.71□□□□□ -2.3
LSM3P62310 FDX1P2-201ENST00000450769 375 ntBASIC0.71□□□□□ -2.3
LSM3P62310 RNU7-95P-201ENST00000459222 64 ntBASIC0.71□□□□□ -2.3
LSM3P62310 AC087477.1-201ENST00000465747 340 ntBASIC0.71□□□□□ -2.3
LSM3P62310 AC104629.1-201ENST00000494226 508 ntBASIC0.71□□□□□ -2.3
LSM3P62310 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.71□□□□□ -2.3
LSM3P62310 AC093809.1-201ENST00000509155 340 ntBASIC0.71□□□□□ -2.3
LSM3P62310 AC093259.1-201ENST00000509755 300 ntBASIC0.71□□□□□ -2.3
LSM3P62310 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.71□□□□□ -2.3
LSM3P62310 RNU6-991P-201ENST00000516168 107 ntBASIC0.71□□□□□ -2.3
LSM3P62310 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.71□□□□□ -2.3
LSM3P62310 AC122134.1-202ENST00000569111 1201 ntBASIC0.71□□□□□ -2.3
LSM3P62310 AL020996.3-201ENST00000606617 222 ntBASIC0.71□□□□□ -2.3
LSM3P62310 AC120349.2-201ENST00000625002 298 ntBASIC0.71□□□□□ -2.3
LSM3P62310 AC099654.9-201ENST00000637055 678 ntBASIC0.71□□□□□ -2.3
LSM3P62310 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.71□□□□□ -2.3
LSM3P62310 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
LSM3P62310 SNORD114-19-201ENST00000363072 75 ntBASIC0.7□□□□□ -2.3
LSM3P62310 RNU6-112P-201ENST00000363599 104 ntBASIC0.7□□□□□ -2.3
LSM3P62310 RNU6-359P-201ENST00000365466 108 ntBASIC0.7□□□□□ -2.3
LSM3P62310 RNU6-952P-201ENST00000391164 108 ntBASIC0.7□□□□□ -2.3
LSM3P62310 USP9YP26-201ENST00000421008 661 ntBASIC0.7□□□□□ -2.3
LSM3P62310 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.7□□□□□ -2.3
LSM3P62310 AL035666.1-201ENST00000446195 348 ntBASIC0.7□□□□□ -2.3
LSM3P62310 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.7□□□□□ -2.3
LSM3P62310 MRPL42P4-201ENST00000453267 443 ntBASIC0.7□□□□□ -2.3
LSM3P62310 AC112492.4-201ENST00000456549 352 ntBASIC0.7□□□□□ -2.3
LSM3P62310 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.7□□□□□ -2.3
LSM3P62310 AC098799.1-201ENST00000504752 800 ntBASIC0.7□□□□□ -2.3
LSM3P62310 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.7□□□□□ -2.3
LSM3P62310 AC027807.1-201ENST00000559921 996 ntBASIC0.7□□□□□ -2.3
LSM3P62310 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.7□□□□□ -2.3
LSM3P62310 MIR3169-201ENST00000578032 83 ntBASIC0.7□□□□□ -2.3
LSM3P62310 MIR3937-201ENST00000580135 106 ntBASIC0.7□□□□□ -2.3
LSM3P62310 AL355802.3-201ENST00000607571 545 ntBASIC0.7□□□□□ -2.3
LSM3P62310 AC243773.3-201ENST00000613270 256 ntBASIC0.7□□□□□ -2.3
LSM3P62310 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.7□□□□□ -2.3
LSM3P62310 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.7□□□□□ -2.3
LSM3P62310 AC100821.1-201ENST00000523153 2479 ntBASIC0.7□□□□□ -2.3
LSM3P62310 AC138393.1-203ENST00000327086 343 ntBASIC0.69□□□□□ -2.3
LSM3P62310 RNU1-17P-201ENST00000363022 152 ntBASIC0.69□□□□□ -2.3
LSM3P62310 SNORA4.1-201ENST00000364263 144 ntBASIC0.69□□□□□ -2.3
LSM3P62310 SNORD114-6-201ENST00000364393 72 ntBASIC0.69□□□□□ -2.3
LSM3P62310 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.69□□□□□ -2.3
LSM3P62310 MRPL35P1-201ENST00000404272 572 ntBASIC0.69□□□□□ -2.3
LSM3P62310 AC138623.1-201ENST00000418060 216 ntBASIC0.69□□□□□ -2.3
LSM3P62310 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.69□□□□□ -2.3
LSM3P62310 USP9YP18-201ENST00000425912 695 ntBASIC0.69□□□□□ -2.3
LSM3P62310 USP9YP17-201ENST00000444617 696 ntBASIC0.69□□□□□ -2.3
LSM3P62310 RPS4XP11-201ENST00000446897 772 ntBASIC0.69□□□□□ -2.3
LSM3P62310 AC130509.1-201ENST00000464158 433 ntBASIC0.69□□□□□ -2.3
LSM3P62310 AC114982.1-201ENST00000469402 321 ntBASIC0.69□□□□□ -2.3
LSM3P62310 AC079140.2-201ENST00000506193 142 ntBASIC0.69□□□□□ -2.3
LSM3P62310 MTCYBP16-201ENST00000509187 1129 ntBASIC0.69□□□□□ -2.3
LSM3P62310 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
LSM3P62310 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.69□□□□□ -2.3
LSM3P62310 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.69□□□□□ -2.3
LSM3P62310 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.69□□□□□ -2.3
LSM3P62310 AC123912.5-201ENST00000605470 343 ntBASIC0.69□□□□□ -2.3
LSM3P62310 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.69□□□□□ -2.3
LSM3P62310 RNU6-91P-201ENST00000607774 107 ntBASIC0.69□□□□□ -2.3
LSM3P62310 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.69□□□□□ -2.3
LSM3P62310 AL445264.1-201ENST00000621719 171 ntBASIC0.69□□□□□ -2.3
LSM3P62310 HAUS6P2-201ENST00000433254 2404 ntBASIC0.69□□□□□ -2.3
LSM3P62310 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
LSM3P62310 RNU6-296P-201ENST00000384608 107 ntBASIC0.68□□□□□ -2.3
LSM3P62310 MIR548B-201ENST00000385247 97 ntBASIC0.68□□□□□ -2.3
LSM3P62310 SNORA17.3-201ENST00000391159 129 ntBASIC0.68□□□□□ -2.3
LSM3P62310 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
LSM3P62310 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.68□□□□□ -2.3
LSM3P62310 BTF3P4-201ENST00000418852 495 ntBASIC0.68□□□□□ -2.3
LSM3P62310 AC245047.4-201ENST00000433189 144 ntBASIC0.68□□□□□ -2.3
LSM3P62310 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
LSM3P62310 PRPS1P1-201ENST00000445305 876 ntBASIC0.68□□□□□ -2.3
LSM3P62310 OR2AQ1P-201ENST00000451972 200 ntBASIC0.68□□□□□ -2.3
LSM3P62310 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.68□□□□□ -2.3
LSM3P62310 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms