Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CDH4P55283 CENPCP1-201ENST00000533085 2578 ntBASIC2.02□□□□□ -2.09
CDH4P55283 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CDH4P55283 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CDH4P55283 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDH4P55283 SNORA46.1-201ENST00000391069 153 ntBASIC2.01□□□□□ -2.09
CDH4P55283 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
CDH4P55283 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH4P55283 RPL23AP39-201ENST00000415533 405 ntBASIC2.01□□□□□ -2.09
CDH4P55283 EDDM3CP-201ENST00000415977 425 ntBASIC2.01□□□□□ -2.09
CDH4P55283 AIMP1P2-201ENST00000425294 312 ntBASIC2.01□□□□□ -2.09
CDH4P55283 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH4P55283 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.01□□□□□ -2.09
CDH4P55283 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH4P55283 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH4P55283 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.01□□□□□ -2.09
CDH4P55283 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH4P55283 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
CDH4P55283 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH4P55283 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH4P55283 SNORA4.4-201ENST00000515921 135 ntBASIC2.01□□□□□ -2.09
CDH4P55283 Y_RNA.689-201ENST00000516589 107 ntBASIC2.01□□□□□ -2.09
CDH4P55283 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.01□□□□□ -2.09
CDH4P55283 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.01□□□□□ -2.09
CDH4P55283 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.01□□□□□ -2.09
CDH4P55283 PSMA3P-201ENST00000555485 635 ntBASIC2.01□□□□□ -2.09
CDH4P55283 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH4P55283 AC025678.1-201ENST00000567861 338 ntBASIC2.01□□□□□ -2.09
CDH4P55283 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH4P55283 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH4P55283 RNU6-91P-201ENST00000607774 107 ntBASIC2.01□□□□□ -2.09
CDH4P55283 AC098657.3-201ENST00000620434 263 ntBASIC2.01□□□□□ -2.09
CDH4P55283 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.01□□□□□ -2.09
CDH4P55283 AC091953.2-201ENST00000623979 160 ntBASIC2.01□□□□□ -2.09
CDH4P55283 AC007671.2-201ENST00000637344 619 ntBASIC2.01□□□□□ -2.09
CDH4P55283 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.01□□□□□ -2.09
CDH4P55283 RNU6-960P-201ENST00000364056 120 ntBASIC2□□□□□ -2.09
CDH4P55283 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
CDH4P55283 AC016831.2-201ENST00000417179 352 ntBASIC2□□□□□ -2.09
CDH4P55283 AC138623.1-201ENST00000418060 216 ntBASIC2□□□□□ -2.09
CDH4P55283 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2□□□□□ -2.09
CDH4P55283 HMGN2P3-201ENST00000433603 273 ntBASIC2□□□□□ -2.09
CDH4P55283 HMGN2P5-201ENST00000436882 273 ntBASIC2□□□□□ -2.09
CDH4P55283 AC118469.1-201ENST00000442943 488 ntBASIC2□□□□□ -2.09
CDH4P55283 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2□□□□□ -2.09
CDH4P55283 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2□□□□□ -2.09
CDH4P55283 AC003071.1-201ENST00000451219 789 ntBASIC2□□□□□ -2.09
CDH4P55283 AC107032.1-201ENST00000485945 480 ntBASIC2□□□□□ -2.09
CDH4P55283 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2□□□□□ -2.09
CDH4P55283 AC117522.2-201ENST00000510049 657 ntBASIC2□□□□□ -2.09
CDH4P55283 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2□□□□□ -2.09
CDH4P55283 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2□□□□□ -2.09
CDH4P55283 ELOCP32-201ENST00000548625 324 ntBASIC2□□□□□ -2.09
CDH4P55283 ZNF519P3-201ENST00000557158 1032 ntBASIC2□□□□□ -2.09
CDH4P55283 AC012435.1-202ENST00000568772 240 ntBASIC2□□□□□ -2.09
CDH4P55283 MIR3118-1-201ENST00000581787 76 ntBASIC2□□□□□ -2.09
CDH4P55283 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2□□□□□ -2.09
CDH4P55283 AC174048.1-201ENST00000603389 144 ntBASIC2□□□□□ -2.09
CDH4P55283 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2□□□□□ -2.09
CDH4P55283 AC009318.2-201ENST00000610917 651 ntBASIC2□□□□□ -2.09
CDH4P55283 AC022202.1-201ENST00000613515 211 ntBASIC2□□□□□ -2.09
CDH4P55283 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2□□□□□ -2.09
CDH4P55283 AC092192.1-201ENST00000633154 1018 ntBASIC2□□□□□ -2.09
CDH4P55283 AP000553.5-201ENST00000641933 54 ntBASIC2□□□□□ -2.09
CDH4P55283 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CDH4P55283 AL445523.1-201ENST00000451184 1362 ntBASIC1.99□□□□□ -2.09
CDH4P55283 RNU6-500P-201ENST00000362349 107 ntBASIC1.99□□□□□ -2.09
CDH4P55283 RNU6-395P-201ENST00000365662 106 ntBASIC1.99□□□□□ -2.09
CDH4P55283 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDH4P55283 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDH4P55283 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.99□□□□□ -2.09
CDH4P55283 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH4P55283 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH4P55283 RPL23AP30-201ENST00000432419 501 ntBASIC1.99□□□□□ -2.09
CDH4P55283 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDH4P55283 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.99□□□□□ -2.09
CDH4P55283 AL008629.1-201ENST00000438615 184 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AC012308.1-201ENST00000451232 178 ntBASIC1.99□□□□□ -2.09
CDH4P55283 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH4P55283 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AL583843.1-201ENST00000456070 346 ntBASIC1.99□□□□□ -2.09
CDH4P55283 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AF131216.2-201ENST00000512316 564 ntBASIC1.99□□□□□ -2.09
CDH4P55283 RNA5SP182-201ENST00000516064 82 ntBASIC1.99□□□□□ -2.09
CDH4P55283 RNU2-19P-201ENST00000517288 84 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH4P55283 FAM92A1P1-201ENST00000528023 890 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.99□□□□□ -2.09
CDH4P55283 MIR4529-201ENST00000578110 78 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.99□□□□□ -2.09
CDH4P55283 AL158827.2-201ENST00000602494 330 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AC022022.2-201ENST00000602989 360 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AL713866.2-201ENST00000603579 219 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AC018638.7-201ENST00000605836 1114 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AC096772.1-201ENST00000609146 564 ntBASIC1.99□□□□□ -2.09
CDH4P55283 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
CDH4P55283 AC023510.2-201ENST00000622162 746 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AC024940.5-201ENST00000622889 474 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AC091932.3-201ENST00000624223 323 ntBASIC1.99□□□□□ -2.09
CDH4P55283 AL691447.3-201ENST00000635020 330 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms