Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PMS2P54278 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.18□□□□□ -1.9
PMS2P54278 UBE2L2-201ENST00000254302 429 ntBASIC3.18□□□□□ -1.9
PMS2P54278 Y_RNA.378-201ENST00000365652 113 ntBASIC3.18□□□□□ -1.9
PMS2P54278 RNU6-190P-201ENST00000384154 102 ntBASIC3.18□□□□□ -1.9
PMS2P54278 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
PMS2P54278 RPS12P24-201ENST00000412619 387 ntBASIC3.18□□□□□ -1.9
PMS2P54278 AC104058.1-201ENST00000448028 297 ntBASIC3.18□□□□□ -1.9
PMS2P54278 RPS15AP27-201ENST00000449183 343 ntBASIC3.18□□□□□ -1.9
PMS2P54278 snoU13.28-201ENST00000459235 104 ntBASIC3.18□□□□□ -1.9
PMS2P54278 RPL21P93-201ENST00000480465 489 ntBASIC3.18□□□□□ -1.9
PMS2P54278 RN7SL499P-201ENST00000481141 276 ntBASIC3.18□□□□□ -1.9
PMS2P54278 RN7SL20P-201ENST00000488827 297 ntBASIC3.18□□□□□ -1.9
PMS2P54278 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.18□□□□□ -1.9
PMS2P54278 RNU4-49P-201ENST00000516080 140 ntBASIC3.18□□□□□ -1.9
PMS2P54278 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PMS2P54278 BTF3P12-201ENST00000519620 469 ntBASIC3.18□□□□□ -1.9
PMS2P54278 AC090136.1-201ENST00000520009 240 ntBASIC3.18□□□□□ -1.9
PMS2P54278 AC105029.1-201ENST00000520250 669 ntBASIC3.18□□□□□ -1.9
PMS2P54278 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.18□□□□□ -1.9
PMS2P54278 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.18□□□□□ -1.9
PMS2P54278 DNAJC8P1-201ENST00000554535 372 ntBASIC3.18□□□□□ -1.9
PMS2P54278 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.18□□□□□ -1.9
PMS2P54278 MIR5583-1-201ENST00000580941 59 ntBASIC3.18□□□□□ -1.9
PMS2P54278 BNIP3P25-201ENST00000596023 559 ntBASIC3.18□□□□□ -1.9
PMS2P54278 AC098826.3-201ENST00000603823 466 ntBASIC3.18□□□□□ -1.9
PMS2P54278 AL161798.1-201ENST00000604630 131 ntBASIC3.18□□□□□ -1.9
PMS2P54278 AC073657.2-201ENST00000605661 303 ntBASIC3.18□□□□□ -1.9
PMS2P54278 AC093913.1-201ENST00000614178 329 ntBASIC3.18□□□□□ -1.9
PMS2P54278 AC103705.1-201ENST00000619013 241 ntBASIC3.18□□□□□ -1.9
PMS2P54278 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PMS2P54278 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.18□□□□□ -1.9
PMS2P54278 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.18□□□□□ -1.9
PMS2P54278 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PMS2P54278 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.17□□□□□ -1.9
PMS2P54278 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
PMS2P54278 AL359693.1-201ENST00000614959 2407 ntBASIC3.17□□□□□ -1.9
PMS2P54278 RNU6-270P-201ENST00000364131 105 ntBASIC3.17□□□□□ -1.9
PMS2P54278 Y_RNA.301-201ENST00000364990 103 ntBASIC3.17□□□□□ -1.9
PMS2P54278 Y_RNA.356-201ENST00000365475 113 ntBASIC3.17□□□□□ -1.9
PMS2P54278 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PMS2P54278 RNU6-116P-201ENST00000384042 109 ntBASIC3.17□□□□□ -1.9
PMS2P54278 AC092809.3-201ENST00000415453 231 ntBASIC3.17□□□□□ -1.9
PMS2P54278 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.17□□□□□ -1.9
PMS2P54278 AL353678.1-201ENST00000422735 741 ntBASIC3.17□□□□□ -1.9
PMS2P54278 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.17□□□□□ -1.9
PMS2P54278 FABP5P13-201ENST00000452144 328 ntBASIC3.17□□□□□ -1.9
PMS2P54278 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.17□□□□□ -1.9
PMS2P54278 AL031183.1-201ENST00000457667 207 ntBASIC3.17□□□□□ -1.9
PMS2P54278 RPL27AP5-201ENST00000469428 449 ntBASIC3.17□□□□□ -1.9
PMS2P54278 TRBV1-201ENST00000476502 284 ntBASIC3.17□□□□□ -1.9
PMS2P54278 RN7SL633P-201ENST00000488974 297 ntBASIC3.17□□□□□ -1.9
PMS2P54278 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.17□□□□□ -1.9
PMS2P54278 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.17□□□□□ -1.9
PMS2P54278 SNORA19.2-201ENST00000516013 114 ntBASIC3.17□□□□□ -1.9
PMS2P54278 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.17□□□□□ -1.9
PMS2P54278 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.17□□□□□ -1.9
PMS2P54278 MIR4513-201ENST00000581077 86 ntBASIC3.17□□□□□ -1.9
PMS2P54278 AL356055.1-201ENST00000602528 446 ntBASIC3.17□□□□□ -1.9
PMS2P54278 AL137843.1-201ENST00000605078 385 ntBASIC3.17□□□□□ -1.9
PMS2P54278 AC022893.3-201ENST00000607665 437 ntBASIC3.17□□□□□ -1.9
PMS2P54278 FTX_3.1-201ENST00000610451 147 ntBASIC3.17□□□□□ -1.9
PMS2P54278 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.17□□□□□ -1.9
PMS2P54278 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.17□□□□□ -1.9
PMS2P54278 TPTEP1-208ENST00000636884 213 ntBASIC3.17□□□□□ -1.9
PMS2P54278 AC108206.1-201ENST00000570186 4159 ntBASIC3.17□□□□□ -1.9
PMS2P54278 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PMS2P54278 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.17□□□□□ -1.9
PMS2P54278 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.17□□□□□ -1.9
PMS2P54278 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.17□□□□□ -1.9
PMS2P54278 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PMS2P54278 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PMS2P54278 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PMS2P54278 GABRG2-229ENST00000641017 3628 ntBASIC3.16□□□□□ -1.9
PMS2P54278 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PMS2P54278 FTLP6-201ENST00000355274 422 ntBASIC3.16□□□□□ -1.9
PMS2P54278 Y_RNA.212-201ENST00000364177 102 ntBASIC3.16□□□□□ -1.9
PMS2P54278 RNU6-371P-201ENST00000364283 108 ntBASIC3.16□□□□□ -1.9
PMS2P54278 Y_RNA.373-201ENST00000365600 103 ntBASIC3.16□□□□□ -1.9
PMS2P54278 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.16□□□□□ -1.9
PMS2P54278 Y_RNA.414-201ENST00000384011 101 ntBASIC3.16□□□□□ -1.9
PMS2P54278 SNORA32.2-201ENST00000384049 122 ntBASIC3.16□□□□□ -1.9
PMS2P54278 RNU6-198P-201ENST00000384258 104 ntBASIC3.16□□□□□ -1.9
PMS2P54278 Y_RNA.534-201ENST00000384599 112 ntBASIC3.16□□□□□ -1.9
PMS2P54278 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PMS2P54278 POLHP1-201ENST00000411806 470 ntBASIC3.16□□□□□ -1.9
PMS2P54278 AC080125.1-201ENST00000414888 684 ntBASIC3.16□□□□□ -1.9
PMS2P54278 AL669831.1-202ENST00000428504 417 ntBASIC3.16□□□□□ -1.9
PMS2P54278 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.16□□□□□ -1.9
PMS2P54278 GTF2IP13-201ENST00000438487 386 ntBASIC3.16□□□□□ -1.9
PMS2P54278 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.16□□□□□ -1.9
PMS2P54278 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.16□□□□□ -1.9
PMS2P54278 RPL21P41-201ENST00000459863 264 ntBASIC3.16□□□□□ -1.9
PMS2P54278 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.16□□□□□ -1.9
PMS2P54278 AC104136.1-201ENST00000512969 394 ntBASIC3.16□□□□□ -1.9
PMS2P54278 RNU6-277P-201ENST00000516272 106 ntBASIC3.16□□□□□ -1.9
PMS2P54278 RNA5SP471-201ENST00000516971 106 ntBASIC3.16□□□□□ -1.9
PMS2P54278 SCOCP1-201ENST00000554676 349 ntBASIC3.16□□□□□ -1.9
PMS2P54278 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.16□□□□□ -1.9
PMS2P54278 MIR3941-201ENST00000582572 103 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 249.3 ms