Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TUG1_2.1-201ENST00000614234 87 ntBASIC0.79□□□□□ -2.28
GTF2A1P52655 RN7SL853P-201ENST00000617250 223 ntBASIC0.79□□□□□ -2.28
GTF2A1P52655 AC019226.1-201ENST00000625666 515 ntBASIC0.79□□□□□ -2.28
GTF2A1P52655 MIR1322-201ENST00000638013 71 ntBASIC0.79□□□□□ -2.28
GTF2A1P52655 AC099063.3-201ENST00000642066 185 ntBASIC0.79□□□□□ -2.28
GTF2A1P52655 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
GTF2A1P52655 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
GTF2A1P52655 RNU6-1280P-201ENST00000365211 107 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 RNU6-546P-201ENST00000383991 107 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 SRIP3-201ENST00000413200 219 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 BX119904.4-201ENST00000424402 301 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.78□□□□□ -2.28
GTF2A1P52655 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.78□□□□□ -2.28
GTF2A1P52655 MTND5P15-201ENST00000434246 349 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 AC092427.1-201ENST00000439177 601 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 AC114982.1-201ENST00000469402 321 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 AC116655.1-201ENST00000508324 901 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 AC109329.1-201ENST00000518744 317 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 CBX3P8-201ENST00000532412 525 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.78□□□□□ -2.28
GTF2A1P52655 AC091057.3-201ENST00000602684 733 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 AP000860.1-201ENST00000605250 559 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 AC009237.15-201ENST00000610252 501 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 AL132822.1-201ENST00000617063 513 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 MIR6134-201ENST00000617606 109 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 AL136313.1-201ENST00000624804 202 ntBASIC0.78□□□□□ -2.28
GTF2A1P52655 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
GTF2A1P52655 RNU6-359P-201ENST00000365466 108 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 RNU6-932P-201ENST00000391108 106 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
GTF2A1P52655 AL590084.2-201ENST00000401481 382 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.77□□□□□ -2.29
GTF2A1P52655 AC008267.5-201ENST00000424928 265 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 ISCA1P1-201ENST00000426679 387 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 PGBD4P5-201ENST00000445958 426 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 AC020550.1-201ENST00000447385 163 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 snoU13.8-201ENST00000458890 104 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 AC087477.1-201ENST00000465747 340 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.77□□□□□ -2.29
GTF2A1P52655 HMGN1P13-201ENST00000505795 138 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.77□□□□□ -2.29
GTF2A1P52655 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 RNU6-1183P-201ENST00000517054 60 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.77□□□□□ -2.29
GTF2A1P52655 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.77□□□□□ -2.29
GTF2A1P52655 AC079148.1-201ENST00000565944 819 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 VN1R80P-201ENST00000597126 338 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 RNU6-91P-201ENST00000607774 107 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 AC253576.2-201ENST00000618815 580 ntBASIC0.77□□□□□ -2.29
GTF2A1P52655 AC138393.1-203ENST00000327086 343 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
GTF2A1P52655 RNU6-343P-201ENST00000364709 104 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 RNU6-549P-201ENST00000384433 107 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 RNU6-1300P-201ENST00000391046 108 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 AC004965.1-201ENST00000413033 213 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.76□□□□□ -2.29
GTF2A1P52655 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.76□□□□□ -2.29
GTF2A1P52655 GPM6BP2-201ENST00000432046 144 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 MTATP6P30-201ENST00000443540 664 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 GPM6BP1-201ENST00000446387 144 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 RPS27P1-201ENST00000450552 247 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 HSPE1P13-201ENST00000451143 297 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.76□□□□□ -2.29
GTF2A1P52655 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.76□□□□□ -2.29
GTF2A1P52655 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.76□□□□□ -2.29
GTF2A1P52655 SNORD116-28-201ENST00000516123 91 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 RNU6-1261P-201ENST00000517194 104 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.76□□□□□ -2.29
GTF2A1P52655 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.76□□□□□ -2.29
GTF2A1P52655 ZNF971P-201ENST00000562068 1249 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 AL450270.1-201ENST00000606160 391 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 Z82243.1-201ENST00000609432 473 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 AL021879.1-201ENST00000611756 288 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.76□□□□□ -2.29
GTF2A1P52655 AC009268.2-201ENST00000621925 457 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 AC099654.5-201ENST00000636479 350 ntBASIC0.76□□□□□ -2.29
GTF2A1P52655 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.76□□□□□ -2.29
GTF2A1P52655 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.76□□□□□ -2.29
GTF2A1P52655 RNU6-23P-201ENST00000363283 107 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 RNU6-743P-201ENST00000364151 106 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 RNU6-968P-201ENST00000384076 107 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 RNU6-481P-201ENST00000384194 107 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 RNU6-733P-201ENST00000410759 104 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.75□□□□□ -2.29
GTF2A1P52655 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.75□□□□□ -2.29
GTF2A1P52655 AC139712.2-201ENST00000424302 339 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 COX7BP2-201ENST00000437976 242 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.75□□□□□ -2.29
GTF2A1P52655 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.75□□□□□ -2.29
GTF2A1P52655 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.75□□□□□ -2.29
GTF2A1P52655 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.75□□□□□ -2.29
GTF2A1P52655 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.75□□□□□ -2.29
GTF2A1P52655 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.75□□□□□ -2.29
GTF2A1P52655 RNU5B-3P-201ENST00000516601 115 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.75□□□□□ -2.29
GTF2A1P52655 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.75□□□□□ -2.29
GTF2A1P52655 AC138915.2-201ENST00000569776 97 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms