Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP11P51784 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.53□□□□□ -1.68
USP11P51784 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.53□□□□□ -1.68
USP11P51784 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.53□□□□□ -1.68
USP11P51784 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP11P51784 U3.13-201ENST00000364804 214 ntBASIC4.53□□□□□ -1.68
USP11P51784 RNU6-102P-201ENST00000384485 104 ntBASIC4.53□□□□□ -1.68
USP11P51784 AL079342.1-201ENST00000401460 267 ntBASIC4.53□□□□□ -1.68
USP11P51784 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.53□□□□□ -1.68
USP11P51784 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.53□□□□□ -1.68
USP11P51784 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.53□□□□□ -1.68
USP11P51784 EIF1P2-201ENST00000428233 350 ntBASIC4.53□□□□□ -1.68
USP11P51784 BX679664.1-201ENST00000434429 253 ntBASIC4.53□□□□□ -1.68
USP11P51784 TBCAP1-201ENST00000436520 327 ntBASIC4.53□□□□□ -1.68
USP11P51784 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.53□□□□□ -1.68
USP11P51784 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.53□□□□□ -1.68
USP11P51784 SNORA25.14-201ENST00000516481 132 ntBASIC4.53□□□□□ -1.68
USP11P51784 AL590705.4-201ENST00000532209 134 ntBASIC4.53□□□□□ -1.68
USP11P51784 AC024405.2-202ENST00000532731 184 ntBASIC4.53□□□□□ -1.68
USP11P51784 AC010186.2-204ENST00000537668 439 ntBASIC4.53□□□□□ -1.68
USP11P51784 HMGB1P14-201ENST00000557424 591 ntBASIC4.53□□□□□ -1.68
USP11P51784 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP11P51784 U2.14-201ENST00000615943 113 ntBASIC4.53□□□□□ -1.68
USP11P51784 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.53□□□□□ -1.68
USP11P51784 AC021753.1-201ENST00000635724 168 ntBASIC4.53□□□□□ -1.68
USP11P51784 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP11P51784 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.53□□□□□ -1.69
USP11P51784 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.53□□□□□ -1.69
USP11P51784 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP11P51784 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP11P51784 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USP11P51784 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
USP11P51784 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.52□□□□□ -1.69
USP11P51784 RNA5SP399-201ENST00000364003 117 ntBASIC4.52□□□□□ -1.69
USP11P51784 RNU1-64P-201ENST00000365443 163 ntBASIC4.52□□□□□ -1.69
USP11P51784 Y_RNA.405-201ENST00000383979 100 ntBASIC4.52□□□□□ -1.69
USP11P51784 Y_RNA.451-201ENST00000384200 100 ntBASIC4.52□□□□□ -1.69
USP11P51784 RNY3P4-201ENST00000384428 101 ntBASIC4.52□□□□□ -1.69
USP11P51784 Y_RNA.524-201ENST00000384564 100 ntBASIC4.52□□□□□ -1.69
USP11P51784 Y_RNA.561-201ENST00000384694 100 ntBASIC4.52□□□□□ -1.69
USP11P51784 MIR124-3-201ENST00000384866 87 ntBASIC4.52□□□□□ -1.69
USP11P51784 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
USP11P51784 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.52□□□□□ -1.69
USP11P51784 Y_RNA.602-201ENST00000410535 92 ntBASIC4.52□□□□□ -1.69
USP11P51784 RNA5SP306-201ENST00000411087 107 ntBASIC4.52□□□□□ -1.69
USP11P51784 AL117339.3-201ENST00000418733 162 ntBASIC4.52□□□□□ -1.69
USP11P51784 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.52□□□□□ -1.69
USP11P51784 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USP11P51784 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.52□□□□□ -1.69
USP11P51784 AC083863.1-201ENST00000438811 231 ntBASIC4.52□□□□□ -1.69
USP11P51784 RPL23AP45-201ENST00000476406 468 ntBASIC4.52□□□□□ -1.69
USP11P51784 RPS26P15-201ENST00000488067 348 ntBASIC4.52□□□□□ -1.69
USP11P51784 RNU6-861P-201ENST00000516745 106 ntBASIC4.52□□□□□ -1.69
USP11P51784 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.52□□□□□ -1.69
USP11P51784 AC103996.1-201ENST00000555468 102 ntBASIC4.52□□□□□ -1.69
USP11P51784 AL157871.3-201ENST00000557231 293 ntBASIC4.52□□□□□ -1.69
USP11P51784 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.52□□□□□ -1.69
USP11P51784 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.52□□□□□ -1.69
USP11P51784 AL360181.4-201ENST00000621752 134 ntBASIC4.52□□□□□ -1.69
USP11P51784 FAM91A3P-201ENST00000456826 2544 ntBASIC4.52□□□□□ -1.69
USP11P51784 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.52□□□□□ -1.69
USP11P51784 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP11P51784 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USP11P51784 AC090740.1-201ENST00000623193 2262 ntBASIC4.52□□□□□ -1.69
USP11P51784 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP11P51784 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
USP11P51784 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP11P51784 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.51□□□□□ -1.69
USP11P51784 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP11P51784 RNU5A-1-201ENST00000362698 116 ntBASIC4.51□□□□□ -1.69
USP11P51784 Y_RNA.170-201ENST00000363746 110 ntBASIC4.51□□□□□ -1.69
USP11P51784 RNU6-213P-201ENST00000384051 104 ntBASIC4.51□□□□□ -1.69
USP11P51784 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
USP11P51784 SNORA12.2-201ENST00000391040 156 ntBASIC4.51□□□□□ -1.69
USP11P51784 MIR1183-201ENST00000408856 89 ntBASIC4.51□□□□□ -1.69
USP11P51784 MTATP6P4-201ENST00000427725 675 ntBASIC4.51□□□□□ -1.69
USP11P51784 AL445305.1-201ENST00000432577 575 ntBASIC4.51□□□□□ -1.69
USP11P51784 AL359073.1-201ENST00000448036 403 ntBASIC4.51□□□□□ -1.69
USP11P51784 AL451050.1-201ENST00000450126 415 ntBASIC4.51□□□□□ -1.69
USP11P51784 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USP11P51784 U8.21-201ENST00000459536 136 ntBASIC4.51□□□□□ -1.69
USP11P51784 AC087588.1-201ENST00000462203 316 ntBASIC4.51□□□□□ -1.69
USP11P51784 RPS29P27-201ENST00000463711 170 ntBASIC4.51□□□□□ -1.69
USP11P51784 RNU6-496P-201ENST00000516145 99 ntBASIC4.51□□□□□ -1.69
USP11P51784 RNA5SP179-201ENST00000517284 121 ntBASIC4.51□□□□□ -1.69
USP11P51784 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
USP11P51784 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP11P51784 MIR4286-201ENST00000580651 93 ntBASIC4.51□□□□□ -1.69
USP11P51784 AC091167.4-201ENST00000605079 184 ntBASIC4.51□□□□□ -1.69
USP11P51784 AC073657.2-201ENST00000605661 303 ntBASIC4.51□□□□□ -1.69
USP11P51784 AC004852.3-201ENST00000614131 326 ntBASIC4.51□□□□□ -1.69
USP11P51784 MIR4727-201ENST00000622232 55 ntBASIC4.51□□□□□ -1.69
USP11P51784 AC006065.5-201ENST00000623427 349 ntBASIC4.51□□□□□ -1.69
USP11P51784 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
USP11P51784 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
USP11P51784 ZNF962P-201ENST00000443465 3140 ntBASIC4.51□□□□□ -1.69
USP11P51784 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USP11P51784 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.51□□□□□ -1.69
USP11P51784 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP11P51784 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms