Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.07□□□□□ -1.76
MRE11P49959 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.07□□□□□ -1.76
MRE11P49959 RPL23AP62-201ENST00000463396 453 ntBASIC4.07□□□□□ -1.76
MRE11P49959 CENPBD1P1-201ENST00000464061 469 ntBASIC4.07□□□□□ -1.76
MRE11P49959 RN7SKP18-201ENST00000516005 275 ntBASIC4.07□□□□□ -1.76
MRE11P49959 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.07□□□□□ -1.76
MRE11P49959 SNORA70.19-201ENST00000516717 90 ntBASIC4.07□□□□□ -1.76
MRE11P49959 RN7SKP258-201ENST00000517151 304 ntBASIC4.07□□□□□ -1.76
MRE11P49959 AC245166.1-201ENST00000521012 253 ntBASIC4.07□□□□□ -1.76
MRE11P49959 RNU6-323P-201ENST00000521915 107 ntBASIC4.07□□□□□ -1.76
MRE11P49959 AP004371.1-201ENST00000525240 214 ntBASIC4.07□□□□□ -1.76
MRE11P49959 MIR3690-201ENST00000580266 75 ntBASIC4.07□□□□□ -1.76
MRE11P49959 SDR42E1P2-201ENST00000614861 481 ntBASIC4.07□□□□□ -1.76
MRE11P49959 MIR4275-201ENST00000636486 87 ntBASIC4.07□□□□□ -1.76
MRE11P49959 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
MRE11P49959 MTND5P30-201ENST00000452896 1731 ntBASIC4.07□□□□□ -1.76
MRE11P49959 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.07□□□□□ -1.76
MRE11P49959 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
MRE11P49959 RNU6-196P-201ENST00000384315 107 ntBASIC4.06□□□□□ -1.76
MRE11P49959 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
MRE11P49959 RPS4XP7-201ENST00000406274 780 ntBASIC4.06□□□□□ -1.76
MRE11P49959 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.06□□□□□ -1.76
MRE11P49959 AL160004.2-201ENST00000432935 350 ntBASIC4.06□□□□□ -1.76
MRE11P49959 SNRPEP4-201ENST00000435815 279 ntBASIC4.06□□□□□ -1.76
MRE11P49959 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.06□□□□□ -1.76
MRE11P49959 AL121871.1-201ENST00000443413 436 ntBASIC4.06□□□□□ -1.76
MRE11P49959 AC026782.1-201ENST00000512952 449 ntBASIC4.06□□□□□ -1.76
MRE11P49959 AC104136.1-201ENST00000512969 394 ntBASIC4.06□□□□□ -1.76
MRE11P49959 SNORA31.3-201ENST00000516029 96 ntBASIC4.06□□□□□ -1.76
MRE11P49959 Y_RNA.708-201ENST00000516950 96 ntBASIC4.06□□□□□ -1.76
MRE11P49959 SNORA31.22-201ENST00000517204 135 ntBASIC4.06□□□□□ -1.76
MRE11P49959 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.06□□□□□ -1.76
MRE11P49959 CYCSP27-201ENST00000527643 293 ntBASIC4.06□□□□□ -1.76
MRE11P49959 AL117187.1-201ENST00000555482 181 ntBASIC4.06□□□□□ -1.76
MRE11P49959 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.06□□□□□ -1.76
MRE11P49959 AC009229.3-201ENST00000608056 282 ntBASIC4.06□□□□□ -1.76
MRE11P49959 PISRT1.1-201ENST00000616930 107 ntBASIC4.06□□□□□ -1.76
MRE11P49959 PLCE1P1-201ENST00000622094 305 ntBASIC4.06□□□□□ -1.76
MRE11P49959 AC092608.2-201ENST00000624427 218 ntBASIC4.06□□□□□ -1.76
MRE11P49959 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.06□□□□□ -1.76
MRE11P49959 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
MRE11P49959 RNU6-600P-201ENST00000362524 99 ntBASIC4.05□□□□□ -1.76
MRE11P49959 Y_RNA.158-201ENST00000363651 101 ntBASIC4.05□□□□□ -1.76
MRE11P49959 RNA5SP50-201ENST00000363731 107 ntBASIC4.05□□□□□ -1.76
MRE11P49959 Y_RNA.404-201ENST00000383978 102 ntBASIC4.05□□□□□ -1.76
MRE11P49959 RNU6-1032P-201ENST00000384100 107 ntBASIC4.05□□□□□ -1.76
MRE11P49959 Y_RNA.473-201ENST00000384333 102 ntBASIC4.05□□□□□ -1.76
MRE11P49959 RNU6-882P-201ENST00000391025 103 ntBASIC4.05□□□□□ -1.76
MRE11P49959 RNU6-817P-201ENST00000391083 104 ntBASIC4.05□□□□□ -1.76
MRE11P49959 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MRE11P49959 RNU6-985P-201ENST00000410182 104 ntBASIC4.05□□□□□ -1.76
MRE11P49959 RNU6-1050P-201ENST00000410388 107 ntBASIC4.05□□□□□ -1.76
MRE11P49959 AL160275.3-201ENST00000423876 471 ntBASIC4.05□□□□□ -1.76
MRE11P49959 RPL21P66-201ENST00000426566 466 ntBASIC4.05□□□□□ -1.76
MRE11P49959 HIGD1AP11-201ENST00000438361 280 ntBASIC4.05□□□□□ -1.76
MRE11P49959 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.05□□□□□ -1.76
MRE11P49959 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.05□□□□□ -1.76
MRE11P49959 RN7SL283P-201ENST00000489055 303 ntBASIC4.05□□□□□ -1.76
MRE11P49959 RNU1-54P-201ENST00000517181 120 ntBASIC4.05□□□□□ -1.76
MRE11P49959 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.05□□□□□ -1.76
MRE11P49959 AC022695.1-201ENST00000522089 237 ntBASIC4.05□□□□□ -1.76
MRE11P49959 AP003122.3-201ENST00000526316 255 ntBASIC4.05□□□□□ -1.76
MRE11P49959 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.05□□□□□ -1.76
MRE11P49959 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.05□□□□□ -1.76
MRE11P49959 AC012493.2-201ENST00000595083 291 ntBASIC4.05□□□□□ -1.76
MRE11P49959 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.05□□□□□ -1.76
MRE11P49959 AC006077.1-201ENST00000604746 343 ntBASIC4.05□□□□□ -1.76
MRE11P49959 AC018462.2-201ENST00000605375 395 ntBASIC4.05□□□□□ -1.76
MRE11P49959 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.05□□□□□ -1.76
MRE11P49959 AL353748.2-201ENST00000622148 471 ntBASIC4.05□□□□□ -1.76
MRE11P49959 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.05□□□□□ -1.76
MRE11P49959 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MRE11P49959 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.04□□□□□ -1.76
MRE11P49959 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MRE11P49959 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
MRE11P49959 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MRE11P49959 RNU6-288P-201ENST00000363690 104 ntBASIC4.04□□□□□ -1.76
MRE11P49959 Y_RNA.252-201ENST00000364556 101 ntBASIC4.04□□□□□ -1.76
MRE11P49959 Y_RNA.463-201ENST00000384271 102 ntBASIC4.04□□□□□ -1.76
MRE11P49959 RNU6-95P-201ENST00000384697 107 ntBASIC4.04□□□□□ -1.76
MRE11P49959 MIR490-201ENST00000384865 128 ntBASIC4.04□□□□□ -1.76
MRE11P49959 MIR568-201ENST00000385036 95 ntBASIC4.04□□□□□ -1.76
MRE11P49959 SNORA75.6-201ENST00000391318 127 ntBASIC4.04□□□□□ -1.76
MRE11P49959 MRPL42P3-201ENST00000401492 326 ntBASIC4.04□□□□□ -1.76
MRE11P49959 SNORA3.3-201ENST00000408712 125 ntBASIC4.04□□□□□ -1.76
MRE11P49959 Y_RNA.594-201ENST00000410373 140 ntBASIC4.04□□□□□ -1.76
MRE11P49959 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.04□□□□□ -1.76
MRE11P49959 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.04□□□□□ -1.76
MRE11P49959 AL591212.2-201ENST00000433923 257 ntBASIC4.04□□□□□ -1.76
MRE11P49959 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.04□□□□□ -1.76
MRE11P49959 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.04□□□□□ -1.76
MRE11P49959 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.04□□□□□ -1.76
MRE11P49959 AC008264.1-201ENST00000447612 367 ntBASIC4.04□□□□□ -1.76
MRE11P49959 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.04□□□□□ -1.76
MRE11P49959 RNU6-953P-201ENST00000459154 107 ntBASIC4.04□□□□□ -1.76
MRE11P49959 AC026801.1-201ENST00000497178 464 ntBASIC4.04□□□□□ -1.76
MRE11P49959 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.04□□□□□ -1.76
MRE11P49959 Y_RNA.670-201ENST00000516255 105 ntBASIC4.04□□□□□ -1.76
MRE11P49959 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.04□□□□□ -1.76
MRE11P49959 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms