Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CLK1P49759 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.82□□□□□ -1.96
CLK1P49759 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.82□□□□□ -1.96
CLK1P49759 Y_RNA.255-201ENST00000364581 97 ntBASIC2.82□□□□□ -1.96
CLK1P49759 MIR454-201ENST00000390180 115 ntBASIC2.82□□□□□ -1.96
CLK1P49759 RPL21P24-201ENST00000413752 448 ntBASIC2.82□□□□□ -1.96
CLK1P49759 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.82□□□□□ -1.96
CLK1P49759 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.82□□□□□ -1.96
CLK1P49759 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLK1P49759 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.82□□□□□ -1.96
CLK1P49759 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.82□□□□□ -1.96
CLK1P49759 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.82□□□□□ -1.96
CLK1P49759 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.82□□□□□ -1.96
CLK1P49759 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.82□□□□□ -1.96
CLK1P49759 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.82□□□□□ -1.96
CLK1P49759 RNU7-63P-201ENST00000459054 62 ntBASIC2.82□□□□□ -1.96
CLK1P49759 GMFBP1-201ENST00000467831 427 ntBASIC2.82□□□□□ -1.96
CLK1P49759 RPL7P49-201ENST00000471402 708 ntBASIC2.82□□□□□ -1.96
CLK1P49759 AL163973.1-201ENST00000484753 577 ntBASIC2.82□□□□□ -1.96
CLK1P49759 RN7SL633P-201ENST00000488974 297 ntBASIC2.82□□□□□ -1.96
CLK1P49759 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.82□□□□□ -1.96
CLK1P49759 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.82□□□□□ -1.96
CLK1P49759 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.82□□□□□ -1.96
CLK1P49759 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.82□□□□□ -1.96
CLK1P49759 HMGB1P41-201ENST00000520234 440 ntBASIC2.82□□□□□ -1.96
CLK1P49759 AP005435.4-201ENST00000529514 284 ntBASIC2.82□□□□□ -1.96
CLK1P49759 AC010186.2-204ENST00000537668 439 ntBASIC2.82□□□□□ -1.96
CLK1P49759 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.82□□□□□ -1.96
CLK1P49759 MIR5571-201ENST00000577998 113 ntBASIC2.82□□□□□ -1.96
CLK1P49759 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.82□□□□□ -1.96
CLK1P49759 BNIP3P10-201ENST00000605360 577 ntBASIC2.82□□□□□ -1.96
CLK1P49759 YPEL5P2-201ENST00000605553 359 ntBASIC2.82□□□□□ -1.96
CLK1P49759 DISC2.1-201ENST00000612827 205 ntBASIC2.82□□□□□ -1.96
CLK1P49759 AC063943.3-201ENST00000615562 356 ntBASIC2.82□□□□□ -1.96
CLK1P49759 AL354950.2-201ENST00000617939 290 ntBASIC2.82□□□□□ -1.96
CLK1P49759 AC010338.1-201ENST00000621823 717 ntBASIC2.82□□□□□ -1.96
CLK1P49759 AC099654.5-201ENST00000636479 350 ntBASIC2.82□□□□□ -1.96
CLK1P49759 MTND4P35-201ENST00000604257 1375 ntBASIC2.82□□□□□ -1.96
CLK1P49759 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLK1P49759 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLK1P49759 RNU5E-6P-201ENST00000365574 115 ntBASIC2.81□□□□□ -1.96
CLK1P49759 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CLK1P49759 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.81□□□□□ -1.96
CLK1P49759 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.81□□□□□ -1.96
CLK1P49759 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.81□□□□□ -1.96
CLK1P49759 RPL23AP11-201ENST00000475260 469 ntBASIC2.81□□□□□ -1.96
CLK1P49759 TRBV1-201ENST00000476502 284 ntBASIC2.81□□□□□ -1.96
CLK1P49759 AC126389.1-201ENST00000477436 290 ntBASIC2.81□□□□□ -1.96
CLK1P49759 RPS27AP9-201ENST00000477681 438 ntBASIC2.81□□□□□ -1.96
CLK1P49759 SLC25A15P5-201ENST00000508033 253 ntBASIC2.81□□□□□ -1.96
CLK1P49759 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.81□□□□□ -1.96
CLK1P49759 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.81□□□□□ -1.96
CLK1P49759 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.81□□□□□ -1.96
CLK1P49759 AC023043.3-201ENST00000593113 385 ntBASIC2.81□□□□□ -1.96
CLK1P49759 AC005261.5-201ENST00000596280 355 ntBASIC2.81□□□□□ -1.96
CLK1P49759 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLK1P49759 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLK1P49759 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
CLK1P49759 AL139276.1-201ENST00000311910 1001 ntBASIC2.8□□□□□ -1.96
CLK1P49759 Y_RNA.61-201ENST00000362835 102 ntBASIC2.8□□□□□ -1.96
CLK1P49759 RNU6-1167P-201ENST00000363227 94 ntBASIC2.8□□□□□ -1.96
CLK1P49759 Y_RNA.157-201ENST00000363638 102 ntBASIC2.8□□□□□ -1.96
CLK1P49759 RNU6-996P-201ENST00000365438 107 ntBASIC2.8□□□□□ -1.96
CLK1P49759 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CLK1P49759 RNU6-1009P-201ENST00000390996 107 ntBASIC2.8□□□□□ -1.96
CLK1P49759 RNU6-1148P-201ENST00000410992 104 ntBASIC2.8□□□□□ -1.96
CLK1P49759 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.8□□□□□ -1.96
CLK1P49759 MTCYBP8-201ENST00000422855 651 ntBASIC2.8□□□□□ -1.96
CLK1P49759 AL451062.2-201ENST00000427515 271 ntBASIC2.8□□□□□ -1.96
CLK1P49759 SRIP2-201ENST00000428470 166 ntBASIC2.8□□□□□ -1.96
CLK1P49759 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.8□□□□□ -1.96
CLK1P49759 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.8□□□□□ -1.96
CLK1P49759 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.8□□□□□ -1.96
CLK1P49759 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.8□□□□□ -1.96
CLK1P49759 MTND1P11-201ENST00000456661 876 ntBASIC2.8□□□□□ -1.96
CLK1P49759 AC080013.2-201ENST00000460866 323 ntBASIC2.8□□□□□ -1.96
CLK1P49759 AC092436.1-201ENST00000506450 503 ntBASIC2.8□□□□□ -1.96
CLK1P49759 HMGB3P3-201ENST00000510526 400 ntBASIC2.8□□□□□ -1.96
CLK1P49759 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.8□□□□□ -1.96
CLK1P49759 RNU2-10P-201ENST00000516375 211 ntBASIC2.8□□□□□ -1.96
CLK1P49759 RNU7-51P-201ENST00000516560 62 ntBASIC2.8□□□□□ -1.96
CLK1P49759 RNA5SP82-201ENST00000516707 92 ntBASIC2.8□□□□□ -1.96
CLK1P49759 SNORD60.2-201ENST00000516883 86 ntBASIC2.8□□□□□ -1.96
CLK1P49759 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.8□□□□□ -1.96
CLK1P49759 AP005902.1-201ENST00000521358 186 ntBASIC2.8□□□□□ -1.96
CLK1P49759 AC100870.1-201ENST00000522035 505 ntBASIC2.8□□□□□ -1.96
CLK1P49759 MIR4775-201ENST00000581168 75 ntBASIC2.8□□□□□ -1.96
CLK1P49759 AC018638.8-201ENST00000588755 281 ntBASIC2.8□□□□□ -1.96
CLK1P49759 AC010525.2-201ENST00000590920 195 ntBASIC2.8□□□□□ -1.96
CLK1P49759 AC069294.1-201ENST00000608397 350 ntBASIC2.8□□□□□ -1.96
CLK1P49759 AC245884.12-201ENST00000615364 59 ntBASIC2.8□□□□□ -1.96
CLK1P49759 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.8□□□□□ -1.96
CLK1P49759 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.8□□□□□ -1.96
CLK1P49759 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.8□□□□□ -1.96
CLK1P49759 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CLK1P49759 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.8□□□□□ -1.96
CLK1P49759 Y_RNA.72-201ENST00000362894 103 ntBASIC2.79□□□□□ -1.96
CLK1P49759 Y_RNA.263-201ENST00000364659 114 ntBASIC2.79□□□□□ -1.96
CLK1P49759 RNU4-20P-201ENST00000365601 151 ntBASIC2.79□□□□□ -1.96
CLK1P49759 MIR514A2-201ENST00000385131 88 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms