Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.86□□□□□ -2.27
SRP9P49458 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.86□□□□□ -2.27
SRP9P49458 LINC00557-201ENST00000563184 1279 ntBASIC0.86□□□□□ -2.27
SRP9P49458 AC091057.3-201ENST00000602684 733 ntBASIC0.86□□□□□ -2.27
SRP9P49458 AL161798.1-201ENST00000604630 131 ntBASIC0.86□□□□□ -2.27
SRP9P49458 TUG1_2.1-201ENST00000614234 87 ntBASIC0.86□□□□□ -2.27
SRP9P49458 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.86□□□□□ -2.27
SRP9P49458 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SRP9P49458 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
SRP9P49458 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
SRP9P49458 RNU6-1300P-201ENST00000391046 108 ntBASIC0.85□□□□□ -2.27
SRP9P49458 RNU2-32P-201ENST00000411193 191 ntBASIC0.85□□□□□ -2.27
SRP9P49458 RPL21P90-201ENST00000415692 466 ntBASIC0.85□□□□□ -2.27
SRP9P49458 MTCO2P5-201ENST00000422621 426 ntBASIC0.85□□□□□ -2.27
SRP9P49458 RPS27P16-201ENST00000425758 201 ntBASIC0.85□□□□□ -2.27
SRP9P49458 CST2P1-201ENST00000425770 87 ntBASIC0.85□□□□□ -2.27
SRP9P49458 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.85□□□□□ -2.27
SRP9P49458 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.85□□□□□ -2.27
SRP9P49458 UBE2V2P3-201ENST00000433562 437 ntBASIC0.85□□□□□ -2.27
SRP9P49458 MTCO1P44-201ENST00000441935 243 ntBASIC0.85□□□□□ -2.27
SRP9P49458 AL022238.1-201ENST00000442557 355 ntBASIC0.85□□□□□ -2.27
SRP9P49458 MTATP6P30-201ENST00000443540 664 ntBASIC0.85□□□□□ -2.27
SRP9P49458 MTND5P8-201ENST00000449817 1083 ntBASIC0.85□□□□□ -2.27
SRP9P49458 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.85□□□□□ -2.27
SRP9P49458 UBL5P1-201ENST00000507979 193 ntBASIC0.85□□□□□ -2.27
SRP9P49458 RNA5SP404-201ENST00000517118 132 ntBASIC0.85□□□□□ -2.27
SRP9P49458 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.85□□□□□ -2.27
SRP9P49458 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.85□□□□□ -2.27
SRP9P49458 MRPS36P5-201ENST00000551909 298 ntBASIC0.85□□□□□ -2.27
SRP9P49458 ZNF971P-201ENST00000562068 1249 ntBASIC0.85□□□□□ -2.27
SRP9P49458 AC012414.6-201ENST00000568241 401 ntBASIC0.85□□□□□ -2.27
SRP9P49458 AC138915.2-201ENST00000569776 97 ntBASIC0.85□□□□□ -2.27
SRP9P49458 MIR4781-201ENST00000585250 76 ntBASIC0.85□□□□□ -2.27
SRP9P49458 DPPA3P3-201ENST00000603842 430 ntBASIC0.85□□□□□ -2.27
SRP9P49458 AC009237.15-201ENST00000610252 501 ntBASIC0.85□□□□□ -2.27
SRP9P49458 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SRP9P49458 AL078604.3-201ENST00000615580 211 ntBASIC0.85□□□□□ -2.27
SRP9P49458 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.85□□□□□ -2.27
SRP9P49458 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SRP9P49458 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SRP9P49458 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SRP9P49458 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
SRP9P49458 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
SRP9P49458 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
SRP9P49458 RNU6-1222P-201ENST00000384615 107 ntBASIC0.84□□□□□ -2.27
SRP9P49458 SNORA48.1-201ENST00000390879 135 ntBASIC0.84□□□□□ -2.27
SRP9P49458 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.84□□□□□ -2.27
SRP9P49458 AL139397.2-201ENST00000404529 772 ntBASIC0.84□□□□□ -2.27
SRP9P49458 AC008267.5-201ENST00000424928 265 ntBASIC0.84□□□□□ -2.27
SRP9P49458 AC114878.1-201ENST00000441166 358 ntBASIC0.84□□□□□ -2.27
SRP9P49458 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.84□□□□□ -2.27
SRP9P49458 AC010409.1-201ENST00000487382 476 ntBASIC0.84□□□□□ -2.27
SRP9P49458 RPS23P4-201ENST00000487908 423 ntBASIC0.84□□□□□ -2.27
SRP9P49458 RNU6-1183P-201ENST00000517054 60 ntBASIC0.84□□□□□ -2.27
SRP9P49458 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.84□□□□□ -2.27
SRP9P49458 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.84□□□□□ -2.27
SRP9P49458 AC093249.1-201ENST00000567049 203 ntBASIC0.84□□□□□ -2.27
SRP9P49458 AC136932.1-201ENST00000574771 208 ntBASIC0.84□□□□□ -2.27
SRP9P49458 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SRP9P49458 AC008759.3-201ENST00000613300 508 ntBASIC0.84□□□□□ -2.27
SRP9P49458 AC012676.2-201ENST00000619258 186 ntBASIC0.84□□□□□ -2.27
SRP9P49458 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.84□□□□□ -2.27
SRP9P49458 U6.99-201ENST00000637524 83 ntBASIC0.84□□□□□ -2.27
SRP9P49458 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
SRP9P49458 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
SRP9P49458 RNU6-512P-201ENST00000364438 103 ntBASIC0.83□□□□□ -2.28
SRP9P49458 NCOR1P3-201ENST00000420479 303 ntBASIC0.83□□□□□ -2.28
SRP9P49458 PRPS1P1-201ENST00000445305 876 ntBASIC0.83□□□□□ -2.28
SRP9P49458 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.83□□□□□ -2.28
SRP9P49458 AC109927.2-201ENST00000506416 303 ntBASIC0.83□□□□□ -2.28
SRP9P49458 MTCYBP43-201ENST00000513621 740 ntBASIC0.83□□□□□ -2.28
SRP9P49458 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.83□□□□□ -2.28
SRP9P49458 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.83□□□□□ -2.28
SRP9P49458 RAB11AP2-201ENST00000545905 639 ntBASIC0.83□□□□□ -2.28
SRP9P49458 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.83□□□□□ -2.28
SRP9P49458 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.83□□□□□ -2.28
SRP9P49458 AC107952.2-201ENST00000606048 486 ntBASIC0.83□□□□□ -2.28
SRP9P49458 MIR8063-201ENST00000621930 81 ntBASIC0.83□□□□□ -2.28
SRP9P49458 AP003485.1-201ENST00000625093 753 ntBASIC0.83□□□□□ -2.28
SRP9P49458 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.83□□□□□ -2.28
SRP9P49458 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SRP9P49458 ICE2P2-201ENST00000483823 2787 ntBASIC0.82□□□□□ -2.28
SRP9P49458 Y_RNA.25-201ENST00000362528 102 ntBASIC0.82□□□□□ -2.28
SRP9P49458 RNU6-114P-201ENST00000384704 105 ntBASIC0.82□□□□□ -2.28
SRP9P49458 MIR506-201ENST00000384998 124 ntBASIC0.82□□□□□ -2.28
SRP9P49458 MIR1267-201ENST00000408723 78 ntBASIC0.82□□□□□ -2.28
SRP9P49458 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SRP9P49458 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.82□□□□□ -2.28
SRP9P49458 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.82□□□□□ -2.28
SRP9P49458 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.82□□□□□ -2.28
SRP9P49458 FABP5P15-201ENST00000453566 214 ntBASIC0.82□□□□□ -2.28
SRP9P49458 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.82□□□□□ -2.28
SRP9P49458 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.82□□□□□ -2.28
SRP9P49458 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.82□□□□□ -2.28
SRP9P49458 RNU6-1261P-201ENST00000517194 104 ntBASIC0.82□□□□□ -2.28
SRP9P49458 CENPUP1-201ENST00000526649 1202 ntBASIC0.82□□□□□ -2.28
SRP9P49458 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.82□□□□□ -2.28
SRP9P49458 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.82□□□□□ -2.28
SRP9P49458 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.82□□□□□ -2.28
SRP9P49458 MIR4666A-201ENST00000580160 79 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms