Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 HMGB1P9-201ENST00000429856 646 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCLP35914 AL445687.1-201ENST00000439946 251 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 AC098831.1-201ENST00000440661 216 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.35□□□□□ -2.03
HMGCLP35914 AC009296.1-201ENST00000443146 155 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCLP35914 DPPA3P1-201ENST00000448050 469 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 AC003071.1-201ENST00000451219 789 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCLP35914 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCLP35914 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCLP35914 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCLP35914 RPS27P26-201ENST00000494583 239 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 RPS27AP10-201ENST00000496103 208 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 Y_RNA.689-201ENST00000516589 107 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 RNU6-1315P-201ENST00000517187 99 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 AC022880.1-201ENST00000534017 973 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 SUB1P2-201ENST00000556401 297 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCLP35914 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGCLP35914 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 AC073534.2-201ENST00000620377 381 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 AC124864.2-201ENST00000624736 186 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGCLP35914 MIR203B-201ENST00000636080 86 ntBASIC2.35□□□□□ -2.03
HMGCLP35914 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.35□□□□□ -2.03
HMGCLP35914 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.35□□□□□ -2.03
HMGCLP35914 ZNF680P1-201ENST00000436625 1469 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 NACAP2-201ENST00000318548 624 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.34□□□□□ -2.03
HMGCLP35914 RNU6-884P-201ENST00000363889 107 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 RNU6-371P-201ENST00000364283 108 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 RNU6-641P-201ENST00000384006 107 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 RNU6-456P-201ENST00000384493 107 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 Y_RNA.517-201ENST00000384551 106 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 MIR301A-201ENST00000385261 86 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 SNORA40C-201ENST00000391285 128 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AC023141.4-201ENST00000412031 328 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.34□□□□□ -2.03
HMGCLP35914 BTF3L4P3-201ENST00000418879 476 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCLP35914 TIMM9P3-201ENST00000428659 274 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCLP35914 AC236972.1-201ENST00000433225 199 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.34□□□□□ -2.03
HMGCLP35914 MTND1P1-201ENST00000445453 368 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCLP35914 AC093899.1-201ENST00000457984 376 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 RPL31P41-201ENST00000477967 372 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 RPL9P6-201ENST00000492764 598 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AC114786.4-201ENST00000508771 728 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AC105417.1-201ENST00000514691 285 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGCLP35914 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCLP35914 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGCLP35914 PRELID2P1-201ENST00000552837 301 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
HMGCLP35914 AL356280.1-201ENST00000603614 379 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AL645944.1-201ENST00000603857 493 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 UCA1.1-201ENST00000620952 75 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AL359880.1-201ENST00000621879 266 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.34□□□□□ -2.03
HMGCLP35914 AL157786.1-207ENST00000627771 695 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGCLP35914 Z99571.1-201ENST00000636677 394 ntBASIC2.34□□□□□ -2.03
HMGCLP35914 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCLP35914 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCLP35914 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
HMGCLP35914 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HMGCLP35914 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.33□□□□□ -2.04
HMGCLP35914 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGCLP35914 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGCLP35914 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGCLP35914 Y_RNA.1-201ENST00000352915 104 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 RNU6-461P-201ENST00000364195 107 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 Z98749.2-208ENST00000381646 500 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 U3.37-201ENST00000408528 213 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGCLP35914 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.33□□□□□ -2.04
HMGCLP35914 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.33□□□□□ -2.04
HMGCLP35914 AL160275.3-201ENST00000423876 471 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 CALM2P2-201ENST00000428512 440 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 AL451074.3-201ENST00000437709 472 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 WASF1P1-201ENST00000447560 1131 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 NDUFB1P2-201ENST00000449477 176 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.33□□□□□ -2.04
HMGCLP35914 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGCLP35914 RNU7-182P-201ENST00000459009 62 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 UBE2DNL-203ENST00000474922 222 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 AC139453.3-201ENST00000493276 369 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 AC107401.1-201ENST00000503426 685 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 AC019235.1-201ENST00000503847 207 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 RBBP4P6-201ENST00000508098 202 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 IGLV3-17-201ENST00000519099 244 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGCLP35914 AC121758.2-201ENST00000553271 193 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 AL157871.3-201ENST00000557231 293 ntBASIC2.33□□□□□ -2.04
HMGCLP35914 MTCO3P23-201ENST00000561363 289 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms