Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDE6BP35913 Y_RNA.26-201ENST00000362539 101 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 RNU4-35P-201ENST00000362588 141 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 Y_RNA.483-201ENST00000384380 101 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.5□□□□□ -1.69
PDE6BP35913 RPS23P3-201ENST00000470993 430 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 AC025518.1-201ENST00000479856 347 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 AC026801.1-201ENST00000497178 464 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 AC114801.2-201ENST00000503825 781 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 AC025554.1-201ENST00000505641 188 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDE6BP35913 AC090281.1-201ENST00000523019 276 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.5□□□□□ -1.69
PDE6BP35913 AC008011.1-201ENST00000545989 227 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.5□□□□□ -1.69
PDE6BP35913 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.5□□□□□ -1.69
PDE6BP35913 AL138889.2-201ENST00000603883 242 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 Z98751.3-201ENST00000604447 521 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 AC008162.1-201ENST00000604718 254 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 AL670379.4-201ENST00000605279 254 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PDE6BP35913 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PDE6BP35913 GABPAP-201ENST00000419271 1356 ntBASIC4.5□□□□□ -1.69
PDE6BP35913 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDE6BP35913 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDE6BP35913 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDE6BP35913 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.49□□□□□ -1.69
PDE6BP35913 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDE6BP35913 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDE6BP35913 Y_RNA.2-201ENST00000362330 96 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 RNU6-1074P-201ENST00000383995 104 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 Y_RNA.461-201ENST00000384263 103 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 SNORA48.5-201ENST00000391143 135 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 MIR1183-201ENST00000408856 89 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 TOMM22P1-201ENST00000418578 312 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.49□□□□□ -1.69
PDE6BP35913 RN7SL432P-201ENST00000484057 298 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.49□□□□□ -1.69
PDE6BP35913 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.49□□□□□ -1.69
PDE6BP35913 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDE6BP35913 SNORA31.8-201ENST00000516327 108 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 Y_RNA.715-201ENST00000517082 110 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.49□□□□□ -1.69
PDE6BP35913 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.49□□□□□ -1.69
PDE6BP35913 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.49□□□□□ -1.69
PDE6BP35913 AC126177.3-201ENST00000551839 688 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 AC026371.1-201ENST00000551867 419 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 SUB1P3-201ENST00000564581 315 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 MIR4513-201ENST00000581077 86 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 AC012603.1-201ENST00000606424 528 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDE6BP35913 AC137590.2-201ENST00000619709 240 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 UBE3AP2-201ENST00000429033 2259 ntBASIC4.49□□□□□ -1.69
PDE6BP35913 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PDE6BP35913 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.49□□□□□ -1.69
PDE6BP35913 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.49□□□□□ -1.69
PDE6BP35913 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.48□□□□□ -1.69
PDE6BP35913 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDE6BP35913 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PDE6BP35913 AL157777.2-201ENST00000258070 137 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 RNU6-50P-201ENST00000362356 103 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 Y_RNA.39-201ENST00000362620 98 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 SNORD6-201ENST00000365444 73 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 Y_RNA.424-201ENST00000384063 103 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 RNU6-434P-201ENST00000384376 107 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 MIR1290-201ENST00000408735 78 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 RNU2-38P-201ENST00000410856 79 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.48□□□□□ -1.69
PDE6BP35913 RPL21P24-201ENST00000413752 448 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 RPL35AP22-201ENST00000436855 335 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 AL359672.1-201ENST00000442302 409 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 AC073910.1-201ENST00000445047 438 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 FTH1P25-201ENST00000447665 469 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 AC105758.1-201ENST00000506038 399 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 AC096745.1-201ENST00000509945 370 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 AC092436.3-201ENST00000511788 257 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.48□□□□□ -1.69
PDE6BP35913 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PDE6BP35913 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.48□□□□□ -1.69
PDE6BP35913 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.48□□□□□ -1.69
PDE6BP35913 MIR7112-201ENST00000616126 65 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 AL589994.2-201ENST00000621124 579 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 MIR4272-201ENST00000635924 64 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDE6BP35913 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDE6BP35913 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.48□□□□□ -1.69
PDE6BP35913 AL136164.4-201ENST00000625013 2135 ntBASIC4.48□□□□□ -1.69
PDE6BP35913 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDE6BP35913 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.47□□□□□ -1.69
PDE6BP35913 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDE6BP35913 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDE6BP35913 IPO8P1-201ENST00000455509 3109 ntBASIC4.47□□□□□ -1.69
PDE6BP35913 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDE6BP35913 RNU6-600P-201ENST00000362524 99 ntBASIC4.47□□□□□ -1.69
PDE6BP35913 Y_RNA.214-201ENST00000364201 112 ntBASIC4.47□□□□□ -1.69
PDE6BP35913 RNU6-637P-201ENST00000384050 107 ntBASIC4.47□□□□□ -1.69
PDE6BP35913 Y_RNA.562-201ENST00000384695 113 ntBASIC4.47□□□□□ -1.69
PDE6BP35913 RNU6-882P-201ENST00000391025 103 ntBASIC4.47□□□□□ -1.69
PDE6BP35913 DBIP2-201ENST00000419076 262 ntBASIC4.47□□□□□ -1.69
PDE6BP35913 ELOCP20-201ENST00000422460 345 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms