Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 FTLP6-201ENST00000355274 422 ntBASIC3.13□□□□□ -1.91
RFC1P35251 RNU6-217P-201ENST00000384164 104 ntBASIC3.13□□□□□ -1.91
RFC1P35251 RNU6-434P-201ENST00000384376 107 ntBASIC3.13□□□□□ -1.91
RFC1P35251 RNA5SP219-201ENST00000390940 113 ntBASIC3.13□□□□□ -1.91
RFC1P35251 RPS4XP7-201ENST00000406274 780 ntBASIC3.13□□□□□ -1.91
RFC1P35251 ARL5AP1-201ENST00000418991 388 ntBASIC3.13□□□□□ -1.91
RFC1P35251 HMGN2P30-201ENST00000423237 256 ntBASIC3.13□□□□□ -1.91
RFC1P35251 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.13□□□□□ -1.91
RFC1P35251 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.13□□□□□ -1.91
RFC1P35251 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.13□□□□□ -1.91
RFC1P35251 RNU7-167P-201ENST00000459160 62 ntBASIC3.13□□□□□ -1.91
RFC1P35251 AC087884.1-201ENST00000469738 328 ntBASIC3.13□□□□□ -1.91
RFC1P35251 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.13□□□□□ -1.91
RFC1P35251 TRBV1-201ENST00000476502 284 ntBASIC3.13□□□□□ -1.91
RFC1P35251 RPS15AP34-201ENST00000487776 387 ntBASIC3.13□□□□□ -1.91
RFC1P35251 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
RFC1P35251 MTND3P25-201ENST00000509243 135 ntBASIC3.13□□□□□ -1.91
RFC1P35251 RNU4-49P-201ENST00000516080 140 ntBASIC3.13□□□□□ -1.91
RFC1P35251 RNA5SP165-201ENST00000517142 115 ntBASIC3.13□□□□□ -1.91
RFC1P35251 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.13□□□□□ -1.91
RFC1P35251 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC1P35251 SCOCP1-201ENST00000554676 349 ntBASIC3.13□□□□□ -1.91
RFC1P35251 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC1P35251 MIR548AC-201ENST00000585049 88 ntBASIC3.13□□□□□ -1.91
RFC1P35251 AL442067.2-201ENST00000614033 363 ntBASIC3.13□□□□□ -1.91
RFC1P35251 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.13□□□□□ -1.91
RFC1P35251 MIR8057-201ENST00000620957 69 ntBASIC3.13□□□□□ -1.91
RFC1P35251 AC090617.7-201ENST00000623952 126 ntBASIC3.13□□□□□ -1.91
RFC1P35251 AC022418.1-201ENST00000624118 445 ntBASIC3.13□□□□□ -1.91
RFC1P35251 AC110079.1-202ENST00000635213 138 ntBASIC3.13□□□□□ -1.91
RFC1P35251 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.13□□□□□ -1.91
RFC1P35251 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFC1P35251 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFC1P35251 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFC1P35251 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.12□□□□□ -1.91
RFC1P35251 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFC1P35251 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC1P35251 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RFC1P35251 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC1P35251 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFC1P35251 SNORD3E-201ENST00000362899 217 ntBASIC3.12□□□□□ -1.91
RFC1P35251 Y_RNA.100-201ENST00000363141 102 ntBASIC3.12□□□□□ -1.91
RFC1P35251 Y_RNA.166-201ENST00000363730 102 ntBASIC3.12□□□□□ -1.91
RFC1P35251 RNU6-270P-201ENST00000364131 105 ntBASIC3.12□□□□□ -1.91
RFC1P35251 SNORD81.2-201ENST00000365153 76 ntBASIC3.12□□□□□ -1.91
RFC1P35251 SNORA70.4-201ENST00000365509 134 ntBASIC3.12□□□□□ -1.91
RFC1P35251 MIR301A-201ENST00000385261 86 ntBASIC3.12□□□□□ -1.91
RFC1P35251 RNU2-3P-201ENST00000410144 191 ntBASIC3.12□□□□□ -1.91
RFC1P35251 RNU2-41P-201ENST00000410991 178 ntBASIC3.12□□□□□ -1.91
RFC1P35251 RPL35AP12-201ENST00000425362 338 ntBASIC3.12□□□□□ -1.91
RFC1P35251 IFNA20P-201ENST00000436840 528 ntBASIC3.12□□□□□ -1.91
RFC1P35251 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC1P35251 RPL7P12-201ENST00000446719 750 ntBASIC3.12□□□□□ -1.91
RFC1P35251 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC1P35251 RPL37P6-201ENST00000460682 294 ntBASIC3.12□□□□□ -1.91
RFC1P35251 RNU6-189P-201ENST00000516120 101 ntBASIC3.12□□□□□ -1.91
RFC1P35251 RNU6-143P-201ENST00000516942 93 ntBASIC3.12□□□□□ -1.91
RFC1P35251 RNA5SP291-201ENST00000517222 105 ntBASIC3.12□□□□□ -1.91
RFC1P35251 AC009812.2-201ENST00000517657 457 ntBASIC3.12□□□□□ -1.91
RFC1P35251 AC090136.1-201ENST00000520009 240 ntBASIC3.12□□□□□ -1.91
RFC1P35251 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC1P35251 AC106782.4-201ENST00000568264 210 ntBASIC3.12□□□□□ -1.91
RFC1P35251 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC1P35251 AC091135.1-201ENST00000585943 307 ntBASIC3.12□□□□□ -1.91
RFC1P35251 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC1P35251 AC007938.3-201ENST00000604965 623 ntBASIC3.12□□□□□ -1.91
RFC1P35251 ATP1B3P1-201ENST00000605365 821 ntBASIC3.12□□□□□ -1.91
RFC1P35251 AL357078.3-201ENST00000607528 618 ntBASIC3.12□□□□□ -1.91
RFC1P35251 Y_RNA.804-201ENST00000615262 101 ntBASIC3.12□□□□□ -1.91
RFC1P35251 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC1P35251 AL035425.3-201ENST00000564206 4996 ntBASIC3.12□□□□□ -1.91
RFC1P35251 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC1P35251 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFC1P35251 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RFC1P35251 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC1P35251 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC1P35251 AL359693.1-201ENST00000614959 2407 ntBASIC3.11□□□□□ -1.91
RFC1P35251 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC1P35251 SNORA71.1-201ENST00000364523 117 ntBASIC3.11□□□□□ -1.91
RFC1P35251 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC1P35251 RNU6-140P-201ENST00000384566 108 ntBASIC3.11□□□□□ -1.91
RFC1P35251 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RFC1P35251 RNU6-1025P-201ENST00000410629 104 ntBASIC3.11□□□□□ -1.91
RFC1P35251 RNA5SP344-201ENST00000411081 104 ntBASIC3.11□□□□□ -1.91
RFC1P35251 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC1P35251 CYCSP33-201ENST00000414485 327 ntBASIC3.11□□□□□ -1.91
RFC1P35251 AC009161.1-201ENST00000417306 376 ntBASIC3.11□□□□□ -1.91
RFC1P35251 USP9YP20-201ENST00000419224 558 ntBASIC3.11□□□□□ -1.91
RFC1P35251 AC093151.1-201ENST00000427711 313 ntBASIC3.11□□□□□ -1.91
RFC1P35251 AC006946.1-201ENST00000429106 328 ntBASIC3.11□□□□□ -1.91
RFC1P35251 SAR1AP4-201ENST00000429225 591 ntBASIC3.11□□□□□ -1.91
RFC1P35251 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.11□□□□□ -1.91
RFC1P35251 SNRPEP9-201ENST00000436794 238 ntBASIC3.11□□□□□ -1.91
RFC1P35251 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.11□□□□□ -1.91
RFC1P35251 RPL12P25-201ENST00000455592 494 ntBASIC3.11□□□□□ -1.91
RFC1P35251 RNU6-329P-201ENST00000459618 107 ntBASIC3.11□□□□□ -1.91
RFC1P35251 AC117503.1-201ENST00000472241 394 ntBASIC3.11□□□□□ -1.91
RFC1P35251 TBCAP3-201ENST00000512475 312 ntBASIC3.11□□□□□ -1.91
RFC1P35251 RNU1-86P-201ENST00000516108 154 ntBASIC3.11□□□□□ -1.91
RFC1P35251 RNU1-107P-201ENST00000516617 154 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms