Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 uc_338.14-201ENST00000613162 166 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 AC010378.1-201ENST00000619270 362 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.05□□□□□ -2.08
SHMT2P34897 AL596028.1-201ENST00000326971 197 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.04□□□□□ -2.08
SHMT2P34897 SNORA24.1-201ENST00000384401 135 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 RNU6-748P-201ENST00000384648 107 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 SNORA64-201ENST00000384674 134 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 AL049545.1-201ENST00000401856 572 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.04□□□□□ -2.08
SHMT2P34897 RNU2-39P-201ENST00000410604 198 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 HMGN1P14-201ENST00000412459 517 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHMT2P34897 AL031779.1-201ENST00000415663 330 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.04□□□□□ -2.08
SHMT2P34897 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.04□□□□□ -2.08
SHMT2P34897 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.04□□□□□ -2.08
SHMT2P34897 IFNA11P-201ENST00000446352 526 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 FABP5P13-201ENST00000452144 328 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 MTND5P30-201ENST00000452896 1731 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.04□□□□□ -2.08
SHMT2P34897 RNU7-26P-201ENST00000458980 63 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 MTND4P2-201ENST00000507767 1203 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.04□□□□□ -2.08
SHMT2P34897 MIR514B-201ENST00000516774 80 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 ACA59.2-201ENST00000517061 156 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 SCARNA3-201ENST00000517097 143 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 HSPE1P18-201ENST00000517602 280 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.04□□□□□ -2.08
SHMT2P34897 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.04□□□□□ -2.08
SHMT2P34897 CYCSP26-201ENST00000534107 320 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 AC010186.2-204ENST00000537668 439 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.04□□□□□ -2.08
SHMT2P34897 AC023824.2-201ENST00000566185 400 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 AL158211.1-201ENST00000566763 763 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 RPS3AP23-202ENST00000574601 686 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 AC005771.1-201ENST00000585581 349 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 NIFKP6-201ENST00000598115 845 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 AL121917.1-203ENST00000605534 577 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 AL021997.1-201ENST00000605757 193 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 AC126118.1-201ENST00000607744 628 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.04□□□□□ -2.08
SHMT2P34897 AL359547.2-201ENST00000615810 418 ntBASIC2.04□□□□□ -2.08
SHMT2P34897 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.04□□□□□ -2.08
SHMT2P34897 AL109809.4-201ENST00000603520 2185 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 AL359854.1-201ENST00000614203 1594 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 SNORD3E-201ENST00000362899 217 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 SNORA20.2-201ENST00000383922 131 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 MIR218-1-201ENST00000384999 110 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 RNU2-8P-201ENST00000410727 190 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.03□□□□□ -2.08
SHMT2P34897 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.03□□□□□ -2.08
SHMT2P34897 Z98742.2-201ENST00000431564 187 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.03□□□□□ -2.08
SHMT2P34897 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.03□□□□□ -2.08
SHMT2P34897 MTND3P7-201ENST00000474435 343 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.03□□□□□ -2.08
SHMT2P34897 AC022493.1-201ENST00000492984 337 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.03□□□□□ -2.08
SHMT2P34897 AC116655.1-201ENST00000508324 901 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.03□□□□□ -2.08
SHMT2P34897 RNU6-123P-201ENST00000516163 102 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 SCARNA24.1-201ENST00000516465 137 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.03□□□□□ -2.08
SHMT2P34897 LINC00933-203ENST00000559812 219 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 AC012414.6-201ENST00000568241 401 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 AC087241.4-201ENST00000612441 480 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 AC009090.3-201ENST00000616553 565 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 AC108479.2-201ENST00000617314 601 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SHMT2P34897 AC024940.5-201ENST00000622889 474 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.03□□□□□ -2.08
SHMT2P34897 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.02□□□□□ -2.09
SHMT2P34897 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.02□□□□□ -2.09
SHMT2P34897 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SHMT2P34897 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.02□□□□□ -2.09
SHMT2P34897 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SHMT2P34897 FGF7P2-201ENST00000332473 296 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 RNU6-169P-201ENST00000365336 107 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 RNU6-641P-201ENST00000384006 107 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 CISD1P1-201ENST00000393907 327 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 CIR1P3-201ENST00000405137 479 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.02□□□□□ -2.09
SHMT2P34897 AL160275.3-201ENST00000423876 471 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.02□□□□□ -2.09
SHMT2P34897 SRIP2-201ENST00000428470 166 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.02□□□□□ -2.09
SHMT2P34897 AC009961.2-201ENST00000435771 251 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 FABP5P14-201ENST00000437273 393 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 RPS15AP9-201ENST00000439856 381 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.02□□□□□ -2.09
SHMT2P34897 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.02□□□□□ -2.09
SHMT2P34897 BTF3P15-201ENST00000455606 336 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 AL583843.1-201ENST00000456070 346 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.02□□□□□ -2.09
SHMT2P34897 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.02□□□□□ -2.09
SHMT2P34897 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms