Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RPS20P22-201ENST00000473700 357 ntBASIC3.31□□□□□ -1.88
CIITAP33076 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.31□□□□□ -1.88
CIITAP33076 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.31□□□□□ -1.88
CIITAP33076 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.31□□□□□ -1.88
CIITAP33076 RNU6-1256P-201ENST00000516539 103 ntBASIC3.31□□□□□ -1.88
CIITAP33076 RNU6-914P-201ENST00000516749 109 ntBASIC3.31□□□□□ -1.88
CIITAP33076 RN7SKP256-201ENST00000517201 314 ntBASIC3.31□□□□□ -1.88
CIITAP33076 AC090115.3-201ENST00000553218 849 ntBASIC3.31□□□□□ -1.88
CIITAP33076 DNAJC8P1-201ENST00000554535 372 ntBASIC3.31□□□□□ -1.88
CIITAP33076 AC026464.5-201ENST00000562497 722 ntBASIC3.31□□□□□ -1.88
CIITAP33076 MIR3942-201ENST00000585264 109 ntBASIC3.31□□□□□ -1.88
CIITAP33076 AC011471.1-201ENST00000585766 187 ntBASIC3.31□□□□□ -1.88
CIITAP33076 AL138889.2-201ENST00000603883 242 ntBASIC3.31□□□□□ -1.88
CIITAP33076 AC087045.1-201ENST00000605856 382 ntBASIC3.31□□□□□ -1.88
CIITAP33076 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.31□□□□□ -1.88
CIITAP33076 AC103705.1-201ENST00000619013 241 ntBASIC3.31□□□□□ -1.88
CIITAP33076 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CIITAP33076 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.31□□□□□ -1.88
CIITAP33076 AL049641.1-201ENST00000441055 1948 ntBASIC3.31□□□□□ -1.88
CIITAP33076 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CIITAP33076 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.3□□□□□ -1.88
CIITAP33076 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CIITAP33076 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CIITAP33076 UBE2L2-201ENST00000254302 429 ntBASIC3.3□□□□□ -1.88
CIITAP33076 SNORA9.2-201ENST00000365361 133 ntBASIC3.3□□□□□ -1.88
CIITAP33076 SNORA4.3-201ENST00000365564 137 ntBASIC3.3□□□□□ -1.88
CIITAP33076 Y_RNA.474-201ENST00000384341 102 ntBASIC3.3□□□□□ -1.88
CIITAP33076 Y_RNA.535-201ENST00000384612 99 ntBASIC3.3□□□□□ -1.88
CIITAP33076 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CIITAP33076 SNORD70.1-201ENST00000391007 85 ntBASIC3.3□□□□□ -1.88
CIITAP33076 AC009161.1-201ENST00000417306 376 ntBASIC3.3□□□□□ -1.88
CIITAP33076 ARL5AP1-201ENST00000418991 388 ntBASIC3.3□□□□□ -1.88
CIITAP33076 USP9YP20-201ENST00000419224 558 ntBASIC3.3□□□□□ -1.88
CIITAP33076 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.3□□□□□ -1.88
CIITAP33076 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.3□□□□□ -1.88
CIITAP33076 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.3□□□□□ -1.88
CIITAP33076 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.3□□□□□ -1.88
CIITAP33076 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.3□□□□□ -1.88
CIITAP33076 DYNLL1P5-201ENST00000467158 270 ntBASIC3.3□□□□□ -1.88
CIITAP33076 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.3□□□□□ -1.88
CIITAP33076 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.3□□□□□ -1.88
CIITAP33076 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.3□□□□□ -1.88
CIITAP33076 RNU2-69P-201ENST00000516061 100 ntBASIC3.3□□□□□ -1.88
CIITAP33076 Y_RNA.691-201ENST00000516611 103 ntBASIC3.3□□□□□ -1.88
CIITAP33076 AC090136.1-201ENST00000520009 240 ntBASIC3.3□□□□□ -1.88
CIITAP33076 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.3□□□□□ -1.88
CIITAP33076 CASP1P1-201ENST00000526345 212 ntBASIC3.3□□□□□ -1.88
CIITAP33076 HPRT1P3-201ENST00000539521 576 ntBASIC3.3□□□□□ -1.88
CIITAP33076 GLYCAM1-201ENST00000546596 285 ntBASIC3.3□□□□□ -1.88
CIITAP33076 AC093027.1-201ENST00000546698 429 ntBASIC3.3□□□□□ -1.88
CIITAP33076 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.3□□□□□ -1.88
CIITAP33076 AL356055.1-201ENST00000602528 446 ntBASIC3.3□□□□□ -1.88
CIITAP33076 AC098826.3-201ENST00000603823 466 ntBASIC3.3□□□□□ -1.88
CIITAP33076 HSPE1P7-201ENST00000604681 321 ntBASIC3.3□□□□□ -1.88
CIITAP33076 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.3□□□□□ -1.88
CIITAP33076 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
CIITAP33076 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CIITAP33076 TPTEP1-208ENST00000636884 213 ntBASIC3.3□□□□□ -1.88
CIITAP33076 MAPK10-322ENST00000641485 4530 ntBASIC3.3□□□□□ -1.88
CIITAP33076 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CIITAP33076 AC006026.1-201ENST00000444025 1803 ntBASIC3.3□□□□□ -1.88
CIITAP33076 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CIITAP33076 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.29□□□□□ -1.88
CIITAP33076 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CIITAP33076 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CIITAP33076 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CIITAP33076 Y_RNA.399-201ENST00000383955 105 ntBASIC3.29□□□□□ -1.88
CIITAP33076 Y_RNA.414-201ENST00000384011 101 ntBASIC3.29□□□□□ -1.88
CIITAP33076 Y_RNA.530-201ENST00000384587 101 ntBASIC3.29□□□□□ -1.88
CIITAP33076 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.29□□□□□ -1.88
CIITAP33076 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.29□□□□□ -1.88
CIITAP33076 AL512844.2-201ENST00000433990 593 ntBASIC3.29□□□□□ -1.88
CIITAP33076 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.29□□□□□ -1.88
CIITAP33076 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.29□□□□□ -1.88
CIITAP33076 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.29□□□□□ -1.88
CIITAP33076 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.29□□□□□ -1.88
CIITAP33076 RN7SL75P-201ENST00000461926 281 ntBASIC3.29□□□□□ -1.88
CIITAP33076 RPL7P43-201ENST00000478876 753 ntBASIC3.29□□□□□ -1.88
CIITAP33076 RNU6-864P-201ENST00000516256 108 ntBASIC3.29□□□□□ -1.88
CIITAP33076 RNU6-1088P-201ENST00000516850 104 ntBASIC3.29□□□□□ -1.88
CIITAP33076 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.29□□□□□ -1.88
CIITAP33076 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.29□□□□□ -1.88
CIITAP33076 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.29□□□□□ -1.88
CIITAP33076 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.29□□□□□ -1.88
CIITAP33076 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.29□□□□□ -1.88
CIITAP33076 EIF4BP1-201ENST00000554881 351 ntBASIC3.29□□□□□ -1.88
CIITAP33076 MIR4795-201ENST00000584182 89 ntBASIC3.29□□□□□ -1.88
CIITAP33076 MIR4298-201ENST00000584380 73 ntBASIC3.29□□□□□ -1.88
CIITAP33076 MIR4719-201ENST00000585233 84 ntBASIC3.29□□□□□ -1.88
CIITAP33076 AC092747.3-201ENST00000603769 301 ntBASIC3.29□□□□□ -1.88
CIITAP33076 AL670379.10-201ENST00000604330 253 ntBASIC3.29□□□□□ -1.88
CIITAP33076 AL161798.1-201ENST00000604630 131 ntBASIC3.29□□□□□ -1.88
CIITAP33076 AL033523.1-201ENST00000605153 153 ntBASIC3.29□□□□□ -1.88
CIITAP33076 AL670379.9-201ENST00000605428 253 ntBASIC3.29□□□□□ -1.88
CIITAP33076 GABRG2-229ENST00000641017 3628 ntBASIC3.29□□□□□ -1.88
CIITAP33076 AC093831.2-201ENST00000624393 3427 ntBASIC3.29□□□□□ -1.88
CIITAP33076 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.28□□□□□ -1.88
CIITAP33076 AP003122.5-201ENST00000527668 3766 ntBASIC3.28□□□□□ -1.88
CIITAP33076 AC091564.4-201ENST00000533934 2194 ntBASIC3.28□□□□□ -1.88
CIITAP33076 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms