Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC027176.1-201ENST00000560204 514 ntBASIC2.98□□□□□ -1.93
HOXA13P31271 AC025281.1-201ENST00000567026 265 ntBASIC2.98□□□□□ -1.93
HOXA13P31271 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXA13P31271 MIR548AC-201ENST00000585049 88 ntBASIC2.98□□□□□ -1.93
HOXA13P31271 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXA13P31271 AC012119.1-201ENST00000603184 222 ntBASIC2.98□□□□□ -1.93
HOXA13P31271 AC008945.2-201ENST00000606056 604 ntBASIC2.98□□□□□ -1.93
HOXA13P31271 AP001330.5-201ENST00000607176 411 ntBASIC2.98□□□□□ -1.93
HOXA13P31271 U6.42-201ENST00000618440 107 ntBASIC2.98□□□□□ -1.93
HOXA13P31271 UCA1.1-201ENST00000620952 75 ntBASIC2.98□□□□□ -1.93
HOXA13P31271 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXA13P31271 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA13P31271 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA13P31271 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA13P31271 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA13P31271 Y_RNA.9-201ENST00000362354 101 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 Y_RNA.89-201ENST00000363031 102 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 RNU6-1085P-201ENST00000363576 107 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 Y_RNA.453-201ENST00000384223 109 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 RNU6-1179P-201ENST00000384667 107 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 RNU6-606P-201ENST00000384721 111 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HOXA13P31271 RNU6-1158P-201ENST00000391167 107 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXA13P31271 BPY2DP-201ENST00000422208 265 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC098614.2-201ENST00000426040 255 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC009414.1-201ENST00000427200 443 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 HMGB1P9-201ENST00000429856 646 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA13P31271 GTF2IP20-201ENST00000431663 360 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AL606489.2-201ENST00000433886 234 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC009296.1-201ENST00000443146 155 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 MRPL50P4-201ENST00000446432 475 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA13P31271 CACYBPP2-201ENST00000453625 678 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA13P31271 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA13P31271 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA13P31271 AC022634.1-201ENST00000520765 532 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC104383.1-201ENST00000530297 370 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA13P31271 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXA13P31271 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.97□□□□□ -1.93
HOXA13P31271 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA13P31271 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA13P31271 AC008752.3-201ENST00000588113 712 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC007621.1-201ENST00000604544 437 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC104458.1-201ENST00000608243 463 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
HOXA13P31271 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
HOXA13P31271 AL354950.2-201ENST00000617939 290 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 U2.21-201ENST00000637295 81 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXA13P31271 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HOXA13P31271 AC110491.1-201ENST00000562191 2010 ntBASIC2.97□□□□□ -1.93
HOXA13P31271 AC004520.1-201ENST00000608362 1413 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA13P31271 Y_RNA.402-201ENST00000383972 102 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 RNU6-550P-201ENST00000391057 101 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 AL590004.2-201ENST00000404787 371 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 USP9YP20-201ENST00000419224 558 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXA13P31271 AL078601.1-201ENST00000444542 271 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 RPS15AP27-201ENST00000449183 343 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 MTATP6P7-201ENST00000453315 681 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXA13P31271 RN7SL283P-201ENST00000489055 303 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXA13P31271 AC098591.2-201ENST00000510152 315 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 RNA5SP282-201ENST00000516355 108 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 RNU6-1183P-201ENST00000517054 60 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 AC009902.1-201ENST00000519351 183 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 MTND1P35-201ENST00000526739 508 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.96□□□□□ -1.94
HOXA13P31271 AC025678.1-201ENST00000567861 338 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 MIR5692A1-201ENST00000580523 69 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXA13P31271 AC008739.2-201ENST00000597006 317 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 AC002064.3-201ENST00000623448 346 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 MTND4P14-201ENST00000435799 1354 ntBASIC2.96□□□□□ -1.94
HOXA13P31271 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXA13P31271 AC008264.2-201ENST00000610193 3731 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA13P31271 Y_RNA.295-201ENST00000364918 102 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 XGY1-201ENST00000381172 446 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 RNA5SP210-201ENST00000391034 120 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 RNU6-908P-201ENST00000410160 94 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 RPL21P90-201ENST00000415692 466 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 AC009963.1-201ENST00000417265 157 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 USP9YP27-201ENST00000418455 438 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA13P31271 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA13P31271 AC011816.1-201ENST00000441346 546 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 AL353572.1-201ENST00000442490 417 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA13P31271 BRK1P2-201ENST00000442875 223 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA13P31271 RPL23AP20-201ENST00000447965 421 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 AL583843.1-201ENST00000456070 346 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 RPS29P25-201ENST00000481709 171 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms