Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 RNY1P16-201ENST00000363063 111 ntBASIC3.71□□□□□ -1.82
PTX3P26022 AC068538.1-201ENST00000376856 336 ntBASIC3.71□□□□□ -1.82
PTX3P26022 MIR199A2-201ENST00000385289 110 ntBASIC3.71□□□□□ -1.82
PTX3P26022 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PTX3P26022 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
PTX3P26022 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.71□□□□□ -1.82
PTX3P26022 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.71□□□□□ -1.82
PTX3P26022 NUP35P1-201ENST00000422734 947 ntBASIC3.71□□□□□ -1.82
PTX3P26022 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.71□□□□□ -1.82
PTX3P26022 AL358176.2-201ENST00000425769 204 ntBASIC3.71□□□□□ -1.82
PTX3P26022 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.71□□□□□ -1.82
PTX3P26022 ARF4P2-201ENST00000430209 526 ntBASIC3.71□□□□□ -1.82
PTX3P26022 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.71□□□□□ -1.82
PTX3P26022 AC007389.2-201ENST00000434630 306 ntBASIC3.71□□□□□ -1.82
PTX3P26022 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.71□□□□□ -1.82
PTX3P26022 AL162151.2-201ENST00000448875 158 ntBASIC3.71□□□□□ -1.82
PTX3P26022 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.71□□□□□ -1.82
PTX3P26022 RN7SL330P-201ENST00000469709 307 ntBASIC3.71□□□□□ -1.82
PTX3P26022 RPL32P34-201ENST00000486380 400 ntBASIC3.71□□□□□ -1.82
PTX3P26022 SNORA43.2-201ENST00000516652 128 ntBASIC3.71□□□□□ -1.82
PTX3P26022 RNU6-1137P-201ENST00000517073 99 ntBASIC3.71□□□□□ -1.82
PTX3P26022 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTX3P26022 MIR5696-201ENST00000578474 85 ntBASIC3.71□□□□□ -1.82
PTX3P26022 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.71□□□□□ -1.82
PTX3P26022 AC092447.9-201ENST00000603395 144 ntBASIC3.71□□□□□ -1.82
PTX3P26022 AC005014.2-201ENST00000607795 599 ntBASIC3.71□□□□□ -1.82
PTX3P26022 MIR6076-201ENST00000617521 113 ntBASIC3.71□□□□□ -1.82
PTX3P26022 AL138825.1-201ENST00000618587 192 ntBASIC3.71□□□□□ -1.82
PTX3P26022 AC119674.1-207ENST00000641355 633 ntBASIC3.71□□□□□ -1.82
PTX3P26022 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTX3P26022 CEP170P1-201ENST00000502249 4587 ntBASIC3.71□□□□□ -1.82
PTX3P26022 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTX3P26022 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
PTX3P26022 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.71□□□□□ -1.82
PTX3P26022 MTND5P9-201ENST00000503854 1755 ntBASIC3.71□□□□□ -1.82
PTX3P26022 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
PTX3P26022 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.71□□□□□ -1.82
PTX3P26022 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.7□□□□□ -1.82
PTX3P26022 ZNF299P-201ENST00000406845 1804 ntBASIC3.7□□□□□ -1.82
PTX3P26022 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTX3P26022 RNU6-227P-201ENST00000362865 103 ntBASIC3.7□□□□□ -1.82
PTX3P26022 SNORA70.2-201ENST00000364506 135 ntBASIC3.7□□□□□ -1.82
PTX3P26022 AL138885.1-201ENST00000405921 675 ntBASIC3.7□□□□□ -1.82
PTX3P26022 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.7□□□□□ -1.82
PTX3P26022 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.7□□□□□ -1.82
PTX3P26022 MTCYBP10-201ENST00000424905 650 ntBASIC3.7□□□□□ -1.82
PTX3P26022 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.7□□□□□ -1.82
PTX3P26022 SNRPEP4-201ENST00000435815 279 ntBASIC3.7□□□□□ -1.82
PTX3P26022 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.7□□□□□ -1.82
PTX3P26022 AC006445.2-201ENST00000510061 472 ntBASIC3.7□□□□□ -1.82
PTX3P26022 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.7□□□□□ -1.82
PTX3P26022 RNU6-764P-201ENST00000516396 105 ntBASIC3.7□□□□□ -1.82
PTX3P26022 RNA5SP164-201ENST00000516533 110 ntBASIC3.7□□□□□ -1.82
PTX3P26022 MIR2116-201ENST00000517221 80 ntBASIC3.7□□□□□ -1.82
PTX3P26022 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.7□□□□□ -1.82
PTX3P26022 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.7□□□□□ -1.82
PTX3P26022 SYF2P1-201ENST00000550658 413 ntBASIC3.7□□□□□ -1.82
PTX3P26022 AC090877.1-201ENST00000561418 344 ntBASIC3.7□□□□□ -1.82
PTX3P26022 AC120057.2-201ENST00000571520 271 ntBASIC3.7□□□□□ -1.82
PTX3P26022 MIR6500-201ENST00000622700 86 ntBASIC3.7□□□□□ -1.82
PTX3P26022 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PTX3P26022 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTX3P26022 AC005592.1-201ENST00000566527 1640 ntBASIC3.7□□□□□ -1.82
PTX3P26022 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTX3P26022 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTX3P26022 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.69□□□□□ -1.82
PTX3P26022 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTX3P26022 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTX3P26022 SPRR2C-201ENST00000290702 219 ntBASIC3.69□□□□□ -1.82
PTX3P26022 Y_RNA.39-201ENST00000362620 98 ntBASIC3.69□□□□□ -1.82
PTX3P26022 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RNA5SP443-201ENST00000363083 132 ntBASIC3.69□□□□□ -1.82
PTX3P26022 Y_RNA.133-201ENST00000363428 110 ntBASIC3.69□□□□□ -1.82
PTX3P26022 Y_RNA.144-201ENST00000363521 113 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RNU6-105P-201ENST00000363909 104 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RNU6-336P-201ENST00000364891 107 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RNU6-898P-201ENST00000365627 104 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RNU1-13P-201ENST00000384499 162 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RNU6-1105P-201ENST00000384774 107 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RNU2-23P-201ENST00000410545 195 ntBASIC3.69□□□□□ -1.82
PTX3P26022 Y_RNA.625-201ENST00000411256 107 ntBASIC3.69□□□□□ -1.82
PTX3P26022 AL117339.2-201ENST00000430475 180 ntBASIC3.69□□□□□ -1.82
PTX3P26022 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.69□□□□□ -1.82
PTX3P26022 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.69□□□□□ -1.82
PTX3P26022 AL590664.1-201ENST00000448065 339 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RPS29P27-201ENST00000463711 170 ntBASIC3.69□□□□□ -1.82
PTX3P26022 FO393415.2-201ENST00000480085 343 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RPS27AP10-201ENST00000496103 208 ntBASIC3.69□□□□□ -1.82
PTX3P26022 AC021146.2-201ENST00000504736 556 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RNU6-1046P-201ENST00000516538 107 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RNU6-928P-201ENST00000516876 104 ntBASIC3.69□□□□□ -1.82
PTX3P26022 RNU7-4P-201ENST00000516961 62 ntBASIC3.69□□□□□ -1.82
PTX3P26022 Y_RNA.721-201ENST00000517207 102 ntBASIC3.69□□□□□ -1.82
PTX3P26022 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.69□□□□□ -1.82
PTX3P26022 AC136624.4-201ENST00000573044 370 ntBASIC3.69□□□□□ -1.82
PTX3P26022 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.69□□□□□ -1.82
PTX3P26022 AL606490.9-201ENST00000603331 271 ntBASIC3.69□□□□□ -1.82
PTX3P26022 AC002076.2-201ENST00000617362 122 ntBASIC3.69□□□□□ -1.82
PTX3P26022 AL162373.1-201ENST00000620433 407 ntBASIC3.69□□□□□ -1.82
PTX3P26022 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms