Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATF4P18848 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
ATF4P18848 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATF4P18848 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
ATF4P18848 Y_RNA.153-201ENST00000363615 91 ntBASIC3.87□□□□□ -1.79
ATF4P18848 RNU1-89P-201ENST00000384592 164 ntBASIC3.87□□□□□ -1.79
ATF4P18848 Y_RNA.551-201ENST00000384661 102 ntBASIC3.87□□□□□ -1.79
ATF4P18848 UBA52P6-201ENST00000399822 382 ntBASIC3.87□□□□□ -1.79
ATF4P18848 MIR921-201ENST00000401133 56 ntBASIC3.87□□□□□ -1.79
ATF4P18848 Z98941.1-201ENST00000407764 100 ntBASIC3.87□□□□□ -1.79
ATF4P18848 MIR548F4-201ENST00000408515 105 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AL358075.3-201ENST00000426289 226 ntBASIC3.87□□□□□ -1.79
ATF4P18848 USP9YP16-201ENST00000430287 407 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AC011742.1-201ENST00000431448 434 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.87□□□□□ -1.79
ATF4P18848 OR4C10P-201ENST00000434991 931 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AC073850.1-201ENST00000449243 255 ntBASIC3.87□□□□□ -1.79
ATF4P18848 USP9YP23-201ENST00000455085 407 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.87□□□□□ -1.79
ATF4P18848 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.87□□□□□ -1.79
ATF4P18848 U8.20-201ENST00000459445 131 ntBASIC3.87□□□□□ -1.79
ATF4P18848 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.87□□□□□ -1.79
ATF4P18848 RPL36AP48-201ENST00000485521 314 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AIG1P1-201ENST00000503376 148 ntBASIC3.87□□□□□ -1.79
ATF4P18848 PARP4P3-201ENST00000510265 317 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AC074250.1-201ENST00000511117 192 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AP002404.1-201ENST00000532005 451 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.87□□□□□ -1.79
ATF4P18848 MIR4700-201ENST00000578311 74 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AC244505.7-201ENST00000599675 272 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AL390123.1-201ENST00000603216 237 ntBASIC3.87□□□□□ -1.79
ATF4P18848 PRR13P7-201ENST00000605538 430 ntBASIC3.87□□□□□ -1.79
ATF4P18848 AL021879.1-201ENST00000611756 288 ntBASIC3.87□□□□□ -1.79
ATF4P18848 7SK.10-201ENST00000621414 298 ntBASIC3.87□□□□□ -1.79
ATF4P18848 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.87□□□□□ -1.79
ATF4P18848 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
ATF4P18848 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
ATF4P18848 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATF4P18848 Z75746.1-201ENST00000440243 2080 ntBASIC3.86□□□□□ -1.79
ATF4P18848 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.86□□□□□ -1.79
ATF4P18848 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATF4P18848 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATF4P18848 RNU6-1027P-201ENST00000383998 107 ntBASIC3.86□□□□□ -1.79
ATF4P18848 SNORA26.3-201ENST00000391119 136 ntBASIC3.86□□□□□ -1.79
ATF4P18848 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATF4P18848 RNA5SP306-201ENST00000411087 107 ntBASIC3.86□□□□□ -1.79
ATF4P18848 AC012306.1-201ENST00000423267 114 ntBASIC3.86□□□□□ -1.79
ATF4P18848 AC017083.1-201ENST00000428093 483 ntBASIC3.86□□□□□ -1.79
ATF4P18848 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.86□□□□□ -1.79
ATF4P18848 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.86□□□□□ -1.79
ATF4P18848 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.86□□□□□ -1.79
ATF4P18848 AL358232.1-201ENST00000448030 501 ntBASIC3.86□□□□□ -1.79
ATF4P18848 RN7SL826P-201ENST00000479724 288 ntBASIC3.86□□□□□ -1.79
ATF4P18848 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.86□□□□□ -1.79
ATF4P18848 MTCO2P24-201ENST00000515611 426 ntBASIC3.86□□□□□ -1.79
ATF4P18848 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.86□□□□□ -1.79
ATF4P18848 AC007458.1-201ENST00000542812 373 ntBASIC3.86□□□□□ -1.79
ATF4P18848 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.86□□□□□ -1.79
ATF4P18848 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.86□□□□□ -1.79
ATF4P18848 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.86□□□□□ -1.79
ATF4P18848 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.86□□□□□ -1.79
ATF4P18848 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.86□□□□□ -1.79
ATF4P18848 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.86□□□□□ -1.79
ATF4P18848 AL159153.1-201ENST00000619688 317 ntBASIC3.86□□□□□ -1.79
ATF4P18848 UCA1.1-201ENST00000620952 75 ntBASIC3.86□□□□□ -1.79
ATF4P18848 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.86□□□□□ -1.79
ATF4P18848 AC110079.1-202ENST00000635213 138 ntBASIC3.86□□□□□ -1.79
ATF4P18848 SNORD98-201ENST00000636377 67 ntBASIC3.86□□□□□ -1.79
ATF4P18848 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATF4P18848 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATF4P18848 Z82217.1-201ENST00000625157 8149 ntBASIC3.86□□□□□ -1.79
ATF4P18848 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ATF4P18848 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATF4P18848 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATF4P18848 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.86□□□□□ -1.79
ATF4P18848 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATF4P18848 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
ATF4P18848 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.85□□□□□ -1.79
ATF4P18848 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATF4P18848 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATF4P18848 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATF4P18848 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.85□□□□□ -1.79
ATF4P18848 AC091564.4-201ENST00000533934 2194 ntBASIC3.85□□□□□ -1.79
ATF4P18848 TNPO1P3-201ENST00000436471 2662 ntBASIC3.85□□□□□ -1.79
ATF4P18848 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.85□□□□□ -1.79
ATF4P18848 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATF4P18848 RNU6-137P-201ENST00000363680 108 ntBASIC3.85□□□□□ -1.79
ATF4P18848 MIR550A3-201ENST00000390735 95 ntBASIC3.85□□□□□ -1.79
ATF4P18848 MIR1182-201ENST00000408363 97 ntBASIC3.85□□□□□ -1.79
ATF4P18848 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATF4P18848 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.85□□□□□ -1.79
ATF4P18848 HMGN2P31-201ENST00000432430 273 ntBASIC3.85□□□□□ -1.79
ATF4P18848 AL772161.1-201ENST00000439130 476 ntBASIC3.85□□□□□ -1.79
ATF4P18848 AC112771.1-201ENST00000463581 102 ntBASIC3.85□□□□□ -1.79
ATF4P18848 AC090525.1-201ENST00000479116 478 ntBASIC3.85□□□□□ -1.79
ATF4P18848 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.85□□□□□ -1.79
ATF4P18848 MRPS35P2-201ENST00000508242 191 ntBASIC3.85□□□□□ -1.79
ATF4P18848 AC026726.1-201ENST00000512859 601 ntBASIC3.85□□□□□ -1.79
ATF4P18848 AC015795.1-201ENST00000513669 327 ntBASIC3.85□□□□□ -1.79
ATF4P18848 RNU6-635P-201ENST00000516651 102 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms