Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC098614.2-201ENST00000426040 255 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 MTND3P9-201ENST00000429526 346 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 AC092423.1-201ENST00000430165 186 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 SNRPEP9-201ENST00000436794 238 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 HIGD1AP2-201ENST00000446367 280 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 snoU109.2-201ENST00000459316 135 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 VWA8P1-201ENST00000510889 176 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 AC109479.2-201ENST00000517842 174 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.16□□□□□ -1.74
ITGA4P13612 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.16□□□□□ -1.74
ITGA4P13612 MIR5696-201ENST00000578474 85 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 MIR5701-3-201ENST00000578890 82 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.16□□□□□ -1.74
ITGA4P13612 MIR5701-1-201ENST00000585138 82 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 AC107871.2-201ENST00000612894 502 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 MIR5701-2-201ENST00000615634 82 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.16□□□□□ -1.74
ITGA4P13612 MTND5P9-201ENST00000503854 1755 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
ITGA4P13612 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ITGA4P13612 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ITGA4P13612 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ITGA4P13612 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ITGA4P13612 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.16□□□□□ -1.74
ITGA4P13612 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.15□□□□□ -1.74
ITGA4P13612 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.15□□□□□ -1.74
ITGA4P13612 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.74
ITGA4P13612 SNORA71.3-201ENST00000362582 128 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 Y_RNA.476-201ENST00000384347 108 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 MIR607-201ENST00000385241 96 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 MIR493-201ENST00000385254 89 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 RPL21P17-201ENST00000397467 475 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.15□□□□□ -1.75
ITGA4P13612 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.15□□□□□ -1.75
ITGA4P13612 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.15□□□□□ -1.75
ITGA4P13612 DYNLT3P2-201ENST00000442517 295 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 RPS3AP12-201ENST00000443616 753 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 OSTCP8-201ENST00000445117 448 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 PCNPP5-201ENST00000452246 481 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 AC013470.1-201ENST00000453438 462 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 MTCO3P8-201ENST00000453691 755 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.15□□□□□ -1.75
ITGA4P13612 UBE2CP3-201ENST00000502715 450 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.15□□□□□ -1.75
ITGA4P13612 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.15□□□□□ -1.75
ITGA4P13612 Y_RNA.668-201ENST00000516233 93 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 RNU6-612P-201ENST00000516909 102 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.15□□□□□ -1.75
ITGA4P13612 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.15□□□□□ -1.75
ITGA4P13612 SRGNP1-201ENST00000603392 451 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.15□□□□□ -1.75
ITGA4P13612 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.15□□□□□ -1.75
ITGA4P13612 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.15□□□□□ -1.75
ITGA4P13612 AL034408.1-202ENST00000636088 415 ntBASIC4.15□□□□□ -1.75
ITGA4P13612 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
ITGA4P13612 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
ITGA4P13612 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.15□□□□□ -1.75
ITGA4P13612 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.14□□□□□ -1.75
ITGA4P13612 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
ITGA4P13612 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.14□□□□□ -1.75
ITGA4P13612 AC106871.1-201ENST00000568324 3102 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ITGA4P13612 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ITGA4P13612 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ITGA4P13612 RNU1-18P-201ENST00000363062 164 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 U3.6-201ENST00000363622 211 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 RNU6-595P-201ENST00000363944 107 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 SNORA5A-201ENST00000384111 134 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ITGA4P13612 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ITGA4P13612 RPL21P1-201ENST00000399532 476 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.14□□□□□ -1.75
ITGA4P13612 NDUFS5P3-201ENST00000450668 321 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.14□□□□□ -1.75
ITGA4P13612 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.14□□□□□ -1.75
ITGA4P13612 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.14□□□□□ -1.75
ITGA4P13612 RN7SL93P-201ENST00000463035 293 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 AP000873.1-201ENST00000463987 400 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.14□□□□□ -1.75
ITGA4P13612 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.14□□□□□ -1.75
ITGA4P13612 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ITGA4P13612 MIR2114-201ENST00000516645 80 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 AC144568.1-201ENST00000520139 137 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.14□□□□□ -1.75
ITGA4P13612 MIR5187-201ENST00000583479 76 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 VN1R91P-201ENST00000594377 169 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 AC006023.2-201ENST00000609916 167 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 U6.99-201ENST00000637524 83 ntBASIC4.14□□□□□ -1.75
ITGA4P13612 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ITGA4P13612 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
ITGA4P13612 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ITGA4P13612 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.13□□□□□ -1.75
ITGA4P13612 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.13□□□□□ -1.75
ITGA4P13612 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ITGA4P13612 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ITGA4P13612 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.13□□□□□ -1.75
ITGA4P13612 AC032011.1-201ENST00000611703 1549 ntBASIC4.13□□□□□ -1.75
ITGA4P13612 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms