Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CALM2P2-201ENST00000428512 440 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 ARL5AP4-201ENST00000430731 512 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 MYL8P-204ENST00000431574 518 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC6P09630 RPL26P6-201ENST00000440913 438 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC6P09630 UQCRHP3-201ENST00000451503 251 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC6P09630 RPL7P43-201ENST00000478876 753 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 Y_RNA.682-201ENST00000516457 100 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 Y_RNA.691-201ENST00000516611 103 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 AC245166.1-201ENST00000521012 253 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 AP000763.2-201ENST00000540641 163 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 AC092747.3-201ENST00000603769 301 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC6P09630 AC012409.4-201ENST00000612923 249 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 uc_338.11-201ENST00000619132 160 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXC6P09630 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXC6P09630 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC6P09630 RNU6-600P-201ENST00000362524 99 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 Y_RNA.132-201ENST00000363421 102 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 Y_RNA.414-201ENST00000384011 101 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 RNU6-1181P-201ENST00000384191 106 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 RNU6-1127P-201ENST00000384580 107 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HOXC6P09630 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HOXC6P09630 RNA5SP508-201ENST00000411327 119 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 RPS15AP27-201ENST00000449183 343 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 SNORA19.2-201ENST00000516013 114 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 RNU6-685P-201ENST00000517088 95 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 IGHV3-76-201ENST00000522465 295 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 AP005597.4-201ENST00000526762 229 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 RANP3-201ENST00000530970 276 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 AC018630.1-201ENST00000541376 925 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXC6P09630 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXC6P09630 AC113139.1-201ENST00000605049 239 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 AC064836.2-201ENST00000609491 462 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXC6P09630 AL590808.1-201ENST00000618696 141 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 AP003400.5-201ENST00000624827 617 ntBASIC3.18□□□□□ -1.9
HOXC6P09630 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXC6P09630 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXC6P09630 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.17□□□□□ -1.9
HOXC6P09630 RNA5SP68-201ENST00000363885 119 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 Y_RNA.530-201ENST00000384587 101 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 SNORD70.1-201ENST00000391007 85 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 snosnR66.1-201ENST00000391095 99 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 CISD1P1-201ENST00000393907 327 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 RNU4-46P-201ENST00000410818 138 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 POLHP1-201ENST00000411806 470 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 MTCO1P39-201ENST00000426148 480 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXC6P09630 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXC6P09630 RN7SL75P-201ENST00000461926 281 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC6P09630 Y_RNA.654-201ENST00000497848 106 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 TRBVA-201ENST00000498804 316 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC6P09630 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC6P09630 RNU6-864P-201ENST00000516256 108 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 SNORA31.20-201ENST00000517111 133 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 RNU6-840P-201ENST00000517275 65 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC6P09630 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC6P09630 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXC6P09630 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXC6P09630 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXC6P09630 OR11H5P-201ENST00000554039 926 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC6P09630 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC6P09630 MIR3690-201ENST00000580266 75 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 POLR3GP2-201ENST00000588366 668 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.17□□□□□ -1.9
HOXC6P09630 SDR42E1P2-201ENST00000614861 481 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 AL359757.2-201ENST00000624309 274 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 MTND4LP32-201ENST00000636111 270 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 HSPA8P4-201ENST00000511877 1920 ntBASIC3.17□□□□□ -1.9
HOXC6P09630 AC004925.1-201ENST00000624256 2706 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 RNA5SP219-201ENST00000390940 113 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 AL592114.1-201ENST00000403842 483 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 BX682237.1-201ENST00000415016 335 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC6P09630 USP9YP20-201ENST00000419224 558 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 RPS15AP6-201ENST00000420703 385 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 MTCO2P12-201ENST00000427426 682 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 MTATP6P4-201ENST00000427725 675 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC6P09630 AC146507.2-201ENST00000460608 476 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 VN1R17P-201ENST00000472048 1090 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 HSPE1P6-201ENST00000479457 291 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC6P09630 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC6P09630 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC6P09630 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXC6P09630 AP002770.2-201ENST00000543613 532 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms