Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.58□□□□□ -2.16
TPM1P09493 AC007363.1-201ENST00000604736 620 ntBASIC1.58□□□□□ -2.16
TPM1P09493 AC112220.2-201ENST00000605513 533 ntBASIC1.58□□□□□ -2.16
TPM1P09493 RMST_6.1-201ENST00000611980 203 ntBASIC1.58□□□□□ -2.16
TPM1P09493 AC090517.3-201ENST00000625170 141 ntBASIC1.58□□□□□ -2.16
TPM1P09493 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.58□□□□□ -2.16
TPM1P09493 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
TPM1P09493 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.57□□□□□ -2.16
TPM1P09493 RNU6-858P-201ENST00000362436 107 ntBASIC1.57□□□□□ -2.16
TPM1P09493 RNU6-529P-201ENST00000363383 104 ntBASIC1.57□□□□□ -2.16
TPM1P09493 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
TPM1P09493 USP9YP33-201ENST00000412220 421 ntBASIC1.57□□□□□ -2.16
TPM1P09493 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.57□□□□□ -2.16
TPM1P09493 AL358453.1-201ENST00000422522 250 ntBASIC1.57□□□□□ -2.16
TPM1P09493 AL354695.1-201ENST00000427935 228 ntBASIC1.57□□□□□ -2.16
TPM1P09493 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.57□□□□□ -2.16
TPM1P09493 USP9YP35-201ENST00000435696 412 ntBASIC1.57□□□□□ -2.16
TPM1P09493 SNRPGP13-201ENST00000442212 177 ntBASIC1.57□□□□□ -2.16
TPM1P09493 AC117532.1-201ENST00000514638 323 ntBASIC1.57□□□□□ -2.16
TPM1P09493 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.57□□□□□ -2.16
TPM1P09493 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.57□□□□□ -2.16
TPM1P09493 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TPM1P09493 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.57□□□□□ -2.16
TPM1P09493 AC012360.2-201ENST00000609349 391 ntBASIC1.57□□□□□ -2.16
TPM1P09493 Z82243.1-201ENST00000609432 473 ntBASIC1.57□□□□□ -2.16
TPM1P09493 AC245297.2-201ENST00000610119 565 ntBASIC1.57□□□□□ -2.16
TPM1P09493 AC004908.3-201ENST00000610248 625 ntBASIC1.57□□□□□ -2.16
TPM1P09493 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.57□□□□□ -2.16
TPM1P09493 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.57□□□□□ -2.16
TPM1P09493 AC123767.1-202ENST00000620407 817 ntBASIC1.57□□□□□ -2.16
TPM1P09493 AP000943.4-201ENST00000622912 357 ntBASIC1.57□□□□□ -2.16
TPM1P09493 MIR3529-201ENST00000637713 78 ntBASIC1.57□□□□□ -2.16
TPM1P09493 AC099654.8-201ENST00000637757 681 ntBASIC1.57□□□□□ -2.16
TPM1P09493 FARSBP1-201ENST00000435808 1778 ntBASIC1.57□□□□□ -2.16
TPM1P09493 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
TPM1P09493 RNU6-661P-201ENST00000362409 107 ntBASIC1.56□□□□□ -2.16
TPM1P09493 AC003071.1-201ENST00000451219 789 ntBASIC1.56□□□□□ -2.16
TPM1P09493 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.56□□□□□ -2.16
TPM1P09493 AC112492.4-201ENST00000456549 352 ntBASIC1.56□□□□□ -2.16
TPM1P09493 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.56□□□□□ -2.16
TPM1P09493 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.56□□□□□ -2.16
TPM1P09493 RNA5SP61-201ENST00000516453 100 ntBASIC1.56□□□□□ -2.16
TPM1P09493 RNU6-295P-201ENST00000516901 104 ntBASIC1.56□□□□□ -2.16
TPM1P09493 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.56□□□□□ -2.16
TPM1P09493 AC008269.2-201ENST00000561915 1105 ntBASIC1.56□□□□□ -2.16
TPM1P09493 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.56□□□□□ -2.16
TPM1P09493 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TPM1P09493 AC011494.1-201ENST00000596454 237 ntBASIC1.56□□□□□ -2.16
TPM1P09493 WISP1-OT1-201ENST00000602893 642 ntBASIC1.56□□□□□ -2.16
TPM1P09493 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.56□□□□□ -2.16
TPM1P09493 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.56□□□□□ -2.16
TPM1P09493 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.56□□□□□ -2.16
TPM1P09493 AC092656.1-203ENST00000624134 423 ntBASIC1.56□□□□□ -2.16
TPM1P09493 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TPM1P09493 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TPM1P09493 U8.1-201ENST00000362843 134 ntBASIC1.55□□□□□ -2.16
TPM1P09493 RNU5A-8P-201ENST00000364102 114 ntBASIC1.55□□□□□ -2.16
TPM1P09493 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
TPM1P09493 RNU6-843P-201ENST00000384454 104 ntBASIC1.55□□□□□ -2.16
TPM1P09493 Y_RNA.534-201ENST00000384599 112 ntBASIC1.55□□□□□ -2.16
TPM1P09493 SNORA48.1-201ENST00000390879 135 ntBASIC1.55□□□□□ -2.16
TPM1P09493 MIR1323-201ENST00000408090 73 ntBASIC1.55□□□□□ -2.16
TPM1P09493 RNU2-36P-201ENST00000410361 191 ntBASIC1.55□□□□□ -2.16
TPM1P09493 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.55□□□□□ -2.16
TPM1P09493 AL591704.1-201ENST00000432574 275 ntBASIC1.55□□□□□ -2.16
TPM1P09493 AC108059.3-201ENST00000456388 214 ntBASIC1.55□□□□□ -2.16
TPM1P09493 RPS29P23-201ENST00000458635 123 ntBASIC1.55□□□□□ -2.16
TPM1P09493 AC108729.1-201ENST00000487812 947 ntBASIC1.55□□□□□ -2.16
TPM1P09493 RNU6-1315P-201ENST00000517187 99 ntBASIC1.55□□□□□ -2.16
TPM1P09493 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.55□□□□□ -2.16
TPM1P09493 BNIP3P27-201ENST00000599991 412 ntBASIC1.55□□□□□ -2.16
TPM1P09493 BNIP3P30-201ENST00000601184 574 ntBASIC1.55□□□□□ -2.16
TPM1P09493 AC092125.1-201ENST00000562568 1995 ntBASIC1.54□□□□□ -2.16
TPM1P09493 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
TPM1P09493 CBX3P1-201ENST00000325243 554 ntBASIC1.54□□□□□ -2.16
TPM1P09493 RNU6-487P-201ENST00000365430 104 ntBASIC1.54□□□□□ -2.16
TPM1P09493 MIR150-201ENST00000385048 84 ntBASIC1.54□□□□□ -2.16
TPM1P09493 RNU6-1025P-201ENST00000410629 104 ntBASIC1.54□□□□□ -2.16
TPM1P09493 RNA5SP100-201ENST00000410903 110 ntBASIC1.54□□□□□ -2.16
TPM1P09493 RNA5SP59-201ENST00000410922 110 ntBASIC1.54□□□□□ -2.16
TPM1P09493 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.54□□□□□ -2.16
TPM1P09493 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.54□□□□□ -2.16
TPM1P09493 USP9YP18-201ENST00000425912 695 ntBASIC1.54□□□□□ -2.16
TPM1P09493 SDAD1P3-201ENST00000427380 333 ntBASIC1.54□□□□□ -2.16
TPM1P09493 AL121601.2-201ENST00000438019 707 ntBASIC1.54□□□□□ -2.16
TPM1P09493 AL354941.1-201ENST00000438600 464 ntBASIC1.54□□□□□ -2.16
TPM1P09493 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.54□□□□□ -2.16
TPM1P09493 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.54□□□□□ -2.16
TPM1P09493 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.54□□□□□ -2.16
TPM1P09493 AC098862.1-201ENST00000504991 413 ntBASIC1.54□□□□□ -2.16
TPM1P09493 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.54□□□□□ -2.16
TPM1P09493 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.54□□□□□ -2.16
TPM1P09493 RN7SKP256-201ENST00000517201 314 ntBASIC1.54□□□□□ -2.16
TPM1P09493 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
TPM1P09493 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.54□□□□□ -2.16
TPM1P09493 AC136618.2-201ENST00000575091 400 ntBASIC1.54□□□□□ -2.16
TPM1P09493 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.54□□□□□ -2.16
TPM1P09493 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.54□□□□□ -2.16
TPM1P09493 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.54□□□□□ -2.16
TPM1P09493 AC009269.6-201ENST00000621778 588 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms