Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU1-54P-201ENST00000517181 120 ntBASIC3.49□□□□□ -1.85
RHOP08100 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RHOP08100 AC004024.1-201ENST00000549244 247 ntBASIC3.49□□□□□ -1.85
RHOP08100 AC025423.5-201ENST00000550230 219 ntBASIC3.49□□□□□ -1.85
RHOP08100 SYF2P1-201ENST00000550658 413 ntBASIC3.49□□□□□ -1.85
RHOP08100 AC018462.2-201ENST00000605375 395 ntBASIC3.49□□□□□ -1.85
RHOP08100 AP000654.2-201ENST00000605633 586 ntBASIC3.49□□□□□ -1.85
RHOP08100 AC073657.2-201ENST00000605661 303 ntBASIC3.49□□□□□ -1.85
RHOP08100 AP002826.1-201ENST00000608835 315 ntBASIC3.49□□□□□ -1.85
RHOP08100 AC040896.1-201ENST00000613819 479 ntBASIC3.49□□□□□ -1.85
RHOP08100 AL162274.2-201ENST00000614406 332 ntBASIC3.49□□□□□ -1.85
RHOP08100 MIR6128-201ENST00000615528 109 ntBASIC3.49□□□□□ -1.85
RHOP08100 U7.8-201ENST00000619968 63 ntBASIC3.49□□□□□ -1.85
RHOP08100 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.49□□□□□ -1.85
RHOP08100 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
RHOP08100 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.49□□□□□ -1.85
RHOP08100 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.49□□□□□ -1.85
RHOP08100 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RHOP08100 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
RHOP08100 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
RHOP08100 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
RHOP08100 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.48□□□□□ -1.85
RHOP08100 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RHOP08100 RNU6-1115P-201ENST00000362490 106 ntBASIC3.48□□□□□ -1.85
RHOP08100 SNORD62.1-201ENST00000362541 86 ntBASIC3.48□□□□□ -1.85
RHOP08100 RNU6-512P-201ENST00000364438 103 ntBASIC3.48□□□□□ -1.85
RHOP08100 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.48□□□□□ -1.85
RHOP08100 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RHOP08100 RNU2-33P-201ENST00000410344 192 ntBASIC3.48□□□□□ -1.85
RHOP08100 CYCSP33-201ENST00000414485 327 ntBASIC3.48□□□□□ -1.85
RHOP08100 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.48□□□□□ -1.85
RHOP08100 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.48□□□□□ -1.85
RHOP08100 AL357552.1-201ENST00000445254 415 ntBASIC3.48□□□□□ -1.85
RHOP08100 S100A11P2-201ENST00000467589 312 ntBASIC3.48□□□□□ -1.85
RHOP08100 RPL27AP5-201ENST00000469428 449 ntBASIC3.48□□□□□ -1.85
RHOP08100 RPL7P5-201ENST00000471472 736 ntBASIC3.48□□□□□ -1.85
RHOP08100 HMGB1P30-201ENST00000492455 606 ntBASIC3.48□□□□□ -1.85
RHOP08100 AC022493.1-201ENST00000492984 337 ntBASIC3.48□□□□□ -1.85
RHOP08100 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.48□□□□□ -1.85
RHOP08100 AC097473.1-201ENST00000508142 408 ntBASIC3.48□□□□□ -1.85
RHOP08100 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.48□□□□□ -1.85
RHOP08100 SMURF2P1-201ENST00000514992 481 ntBASIC3.48□□□□□ -1.85
RHOP08100 RNU1-61P-201ENST00000516107 151 ntBASIC3.48□□□□□ -1.85
RHOP08100 RNA5SP341-201ENST00000516261 117 ntBASIC3.48□□□□□ -1.85
RHOP08100 RNU6-1256P-201ENST00000516539 103 ntBASIC3.48□□□□□ -1.85
RHOP08100 RNU6-143P-201ENST00000516942 93 ntBASIC3.48□□□□□ -1.85
RHOP08100 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.48□□□□□ -1.85
RHOP08100 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.48□□□□□ -1.85
RHOP08100 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.48□□□□□ -1.85
RHOP08100 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.48□□□□□ -1.85
RHOP08100 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
RHOP08100 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RHOP08100 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RHOP08100 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RHOP08100 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RHOP08100 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RHOP08100 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RHOP08100 AL353746.1-201ENST00000566293 6881 ntBASIC3.47□□□□□ -1.85
RHOP08100 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RHOP08100 Y_RNA.28-201ENST00000362554 111 ntBASIC3.47□□□□□ -1.85
RHOP08100 Y_RNA.33-201ENST00000362591 102 ntBASIC3.47□□□□□ -1.85
RHOP08100 RNA5SP295-201ENST00000362655 121 ntBASIC3.47□□□□□ -1.85
RHOP08100 Y_RNA.145-201ENST00000363527 102 ntBASIC3.47□□□□□ -1.85
RHOP08100 SNORA22B-201ENST00000383876 138 ntBASIC3.47□□□□□ -1.85
RHOP08100 RNU6-741P-201ENST00000383889 107 ntBASIC3.47□□□□□ -1.85
RHOP08100 AP000567.1-201ENST00000406413 156 ntBASIC3.47□□□□□ -1.85
RHOP08100 RNU6-293P-201ENST00000411259 106 ntBASIC3.47□□□□□ -1.85
RHOP08100 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.47□□□□□ -1.85
RHOP08100 AL159169.1-201ENST00000421119 127 ntBASIC3.47□□□□□ -1.85
RHOP08100 UBE2D3P2-201ENST00000424409 445 ntBASIC3.47□□□□□ -1.85
RHOP08100 HIGD1AP11-201ENST00000438361 280 ntBASIC3.47□□□□□ -1.85
RHOP08100 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.47□□□□□ -1.85
RHOP08100 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.47□□□□□ -1.85
RHOP08100 SNORD5.1-201ENST00000458800 75 ntBASIC3.47□□□□□ -1.85
RHOP08100 AC109925.1-201ENST00000478069 331 ntBASIC3.47□□□□□ -1.85
RHOP08100 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
RHOP08100 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.47□□□□□ -1.85
RHOP08100 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.47□□□□□ -1.85
RHOP08100 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.47□□□□□ -1.85
RHOP08100 SNORA70.16-201ENST00000516390 95 ntBASIC3.47□□□□□ -1.85
RHOP08100 HIGD1AP1-201ENST00000550979 275 ntBASIC3.47□□□□□ -1.85
RHOP08100 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.47□□□□□ -1.85
RHOP08100 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.47□□□□□ -1.85
RHOP08100 AL137843.1-201ENST00000605078 385 ntBASIC3.47□□□□□ -1.85
RHOP08100 AC016925.2-201ENST00000605108 242 ntBASIC3.47□□□□□ -1.85
RHOP08100 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.47□□□□□ -1.85
RHOP08100 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RHOP08100 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RHOP08100 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RHOP08100 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RHOP08100 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
RHOP08100 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.47□□□□□ -1.85
RHOP08100 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.47□□□□□ -1.85
RHOP08100 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.47□□□□□ -1.85
RHOP08100 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.46□□□□□ -1.86
RHOP08100 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
RHOP08100 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.46□□□□□ -1.86
RHOP08100 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RHOP08100 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
RHOP08100 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms