Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL359854.1-201ENST00000614203 1594 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 ZNF658B-202ENST00000615961 3375 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
GGPS1O95749 HSPA8P4-201ENST00000511877 1920 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
GGPS1O95749 AC006020.1-201ENST00000420179 1854 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.74□□□□□ -1.97
GGPS1O95749 RNU6-181P-201ENST00000363225 107 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 SNORD14B-201ENST00000364533 90 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.74□□□□□ -1.97
GGPS1O95749 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
GGPS1O95749 Y_RNA.553-201ENST00000384670 102 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 MIR1-2-201ENST00000384961 85 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.74□□□□□ -1.97
GGPS1O95749 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.74□□□□□ -1.97
GGPS1O95749 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.74□□□□□ -1.97
GGPS1O95749 FABP5P14-201ENST00000437273 393 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 HIGD1AP2-201ENST00000446367 280 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 AL360271.2-201ENST00000447710 161 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 AC104058.1-201ENST00000448028 297 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 AL441985.1-201ENST00000457727 251 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 AC023141.11-201ENST00000508864 202 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 AC008716.1-201ENST00000511084 513 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.74□□□□□ -1.97
GGPS1O95749 AC117532.1-201ENST00000514638 323 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 RNU6-445P-201ENST00000516949 107 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 MTCO2P4-201ENST00000517968 247 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.74□□□□□ -1.97
GGPS1O95749 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.74□□□□□ -1.97
GGPS1O95749 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.74□□□□□ -1.97
GGPS1O95749 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.74□□□□□ -1.97
GGPS1O95749 AC092325.1-201ENST00000566449 554 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 MIR4765-201ENST00000585007 77 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.74□□□□□ -1.97
GGPS1O95749 AC010620.1-201ENST00000601088 1102 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 AL670379.4-201ENST00000605279 254 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 AC098614.4-201ENST00000607601 462 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.74□□□□□ -1.97
GGPS1O95749 AC005332.10-201ENST00000612725 619 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 U6.42-201ENST00000618440 107 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.74□□□□□ -1.97
GGPS1O95749 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.74□□□□□ -1.97
GGPS1O95749 U6.114-201ENST00000636407 96 ntBASIC2.74□□□□□ -1.97
GGPS1O95749 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.74□□□□□ -1.97
GGPS1O95749 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
GGPS1O95749 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
GGPS1O95749 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
GGPS1O95749 SNORA62.1-201ENST00000364287 154 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 SNORD116-9-201ENST00000384000 95 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 SNORD116-3-201ENST00000384287 95 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 SNORD116-7-201ENST00000384404 95 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 SNORD116-5-201ENST00000384462 95 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 RNU6-220P-201ENST00000390919 107 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
GGPS1O95749 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
GGPS1O95749 AL139095.1-201ENST00000404326 391 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 AC016831.2-201ENST00000417179 352 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 Z98742.3-201ENST00000418637 326 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.73□□□□□ -1.97
GGPS1O95749 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.73□□□□□ -1.97
GGPS1O95749 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.73□□□□□ -1.97
GGPS1O95749 AC022364.2-201ENST00000457963 554 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.73□□□□□ -1.97
GGPS1O95749 AC010424.1-201ENST00000506336 297 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 AC104806.1-201ENST00000508720 308 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.73□□□□□ -1.97
GGPS1O95749 SCARNA3-201ENST00000517097 143 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 OR5AQ1P-201ENST00000527596 927 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 AC021269.2-201ENST00000532318 330 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.73□□□□□ -1.97
GGPS1O95749 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
GGPS1O95749 AC119751.7-201ENST00000600494 245 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 AC046143.2-201ENST00000609789 160 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
GGPS1O95749 AC010378.1-201ENST00000619270 362 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 AC011155.2-201ENST00000623202 216 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 AL390237.1-201ENST00000404226 1415 ntBASIC2.73□□□□□ -1.97
GGPS1O95749 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
GGPS1O95749 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
GGPS1O95749 AC069528.2-201ENST00000624849 1991 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
GGPS1O95749 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
GGPS1O95749 U8.2-201ENST00000363156 134 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 RNU6-371P-201ENST00000364283 108 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 RNU6-456P-201ENST00000384493 107 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 RNU6-1179P-201ENST00000384667 107 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 CIR1P3-201ENST00000405137 479 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 U3.37-201ENST00000408528 213 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 OR6C66P-201ENST00000414917 930 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.72□□□□□ -1.97
GGPS1O95749 Z98742.2-201ENST00000431564 187 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.72□□□□□ -1.97
GGPS1O95749 MTCO2P16-201ENST00000436962 677 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 MTND4P32-201ENST00000437189 1237 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 RPS15AP9-201ENST00000439856 381 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.72□□□□□ -1.97
GGPS1O95749 MTCO1P19-201ENST00000443487 500 ntBASIC2.72□□□□□ -1.97
GGPS1O95749 C1DP4-201ENST00000455429 424 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms