Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
BEST1O76090 BX276092.3-201ENST00000424182 230 ntBASIC2.79□□□□□ -1.96
BEST1O76090 AC000111.3-201ENST00000433478 193 ntBASIC2.79□□□□□ -1.96
BEST1O76090 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.79□□□□□ -1.96
BEST1O76090 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.79□□□□□ -1.96
BEST1O76090 EEF1B2P7-201ENST00000451177 676 ntBASIC2.79□□□□□ -1.96
BEST1O76090 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.79□□□□□ -1.96
BEST1O76090 AC080013.2-201ENST00000460866 323 ntBASIC2.79□□□□□ -1.96
BEST1O76090 AC011005.2-201ENST00000487324 359 ntBASIC2.79□□□□□ -1.96
BEST1O76090 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.79□□□□□ -1.96
BEST1O76090 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.79□□□□□ -1.96
BEST1O76090 AC108078.1-201ENST00000508073 725 ntBASIC2.79□□□□□ -1.96
BEST1O76090 AC114781.4-201ENST00000513707 639 ntBASIC2.79□□□□□ -1.96
BEST1O76090 RNU6-405P-201ENST00000516637 110 ntBASIC2.79□□□□□ -1.96
BEST1O76090 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.79□□□□□ -1.96
BEST1O76090 AC109329.2-201ENST00000519658 482 ntBASIC2.79□□□□□ -1.96
BEST1O76090 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.79□□□□□ -1.96
BEST1O76090 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.79□□□□□ -1.96
BEST1O76090 MIR3162-201ENST00000581818 82 ntBASIC2.79□□□□□ -1.96
BEST1O76090 MIR4635-201ENST00000583759 79 ntBASIC2.79□□□□□ -1.96
BEST1O76090 AC087683.1-201ENST00000591187 441 ntBASIC2.79□□□□□ -1.96
BEST1O76090 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.79□□□□□ -1.96
BEST1O76090 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.79□□□□□ -1.96
BEST1O76090 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.79□□□□□ -1.96
BEST1O76090 CR381653.2-201ENST00000624041 768 ntBASIC2.79□□□□□ -1.96
BEST1O76090 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.79□□□□□ -1.96
BEST1O76090 MIR3529-201ENST00000637713 78 ntBASIC2.79□□□□□ -1.96
BEST1O76090 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
BEST1O76090 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.78□□□□□ -1.96
BEST1O76090 RNU6-607P-201ENST00000411283 108 ntBASIC2.78□□□□□ -1.96
BEST1O76090 BMS1P22-201ENST00000414726 313 ntBASIC2.78□□□□□ -1.96
BEST1O76090 AC097463.2-201ENST00000421074 142 ntBASIC2.78□□□□□ -1.96
BEST1O76090 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.78□□□□□ -1.96
BEST1O76090 AC002486.1-201ENST00000435098 391 ntBASIC2.78□□□□□ -1.96
BEST1O76090 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.78□□□□□ -1.96
BEST1O76090 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST1O76090 AC104389.3-201ENST00000445629 235 ntBASIC2.78□□□□□ -1.96
BEST1O76090 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.78□□□□□ -1.96
BEST1O76090 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST1O76090 snoU109.2-201ENST00000459316 135 ntBASIC2.78□□□□□ -1.96
BEST1O76090 UBE2DNL-203ENST00000474922 222 ntBASIC2.78□□□□□ -1.96
BEST1O76090 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.78□□□□□ -1.96
BEST1O76090 RPL36AP48-201ENST00000485521 314 ntBASIC2.78□□□□□ -1.96
BEST1O76090 AC018437.1-201ENST00000492214 406 ntBASIC2.78□□□□□ -1.96
BEST1O76090 AC074344.1-201ENST00000512823 224 ntBASIC2.78□□□□□ -1.96
BEST1O76090 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST1O76090 RNU1-86P-201ENST00000516108 154 ntBASIC2.78□□□□□ -1.96
BEST1O76090 RNU1-107P-201ENST00000516617 154 ntBASIC2.78□□□□□ -1.96
BEST1O76090 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST1O76090 AC073539.2-201ENST00000597113 165 ntBASIC2.78□□□□□ -1.96
BEST1O76090 NDUFA8P1-201ENST00000605525 367 ntBASIC2.78□□□□□ -1.96
BEST1O76090 AC069294.1-201ENST00000608397 350 ntBASIC2.78□□□□□ -1.96
BEST1O76090 AC007684.1-201ENST00000609671 477 ntBASIC2.78□□□□□ -1.96
BEST1O76090 AC107871.2-201ENST00000612894 502 ntBASIC2.78□□□□□ -1.96
BEST1O76090 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.78□□□□□ -1.96
BEST1O76090 HAUS6P2-201ENST00000433254 2404 ntBASIC2.78□□□□□ -1.97
BEST1O76090 AC108206.1-201ENST00000570186 4159 ntBASIC2.78□□□□□ -1.97
BEST1O76090 AL139276.1-201ENST00000311910 1001 ntBASIC2.77□□□□□ -1.97
BEST1O76090 OR4G2P-201ENST00000328113 903 ntBASIC2.77□□□□□ -1.97
BEST1O76090 RNU6-858P-201ENST00000362436 107 ntBASIC2.77□□□□□ -1.97
BEST1O76090 RNU6-942P-201ENST00000363002 107 ntBASIC2.77□□□□□ -1.97
BEST1O76090 RNU6-715P-201ENST00000365204 103 ntBASIC2.77□□□□□ -1.97
BEST1O76090 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
BEST1O76090 MIR196B-201ENST00000384852 84 ntBASIC2.77□□□□□ -1.97
BEST1O76090 RPS4XP8-201ENST00000402039 771 ntBASIC2.77□□□□□ -1.97
BEST1O76090 RPL19P1-201ENST00000411635 428 ntBASIC2.77□□□□□ -1.97
BEST1O76090 BTF3L4P1-201ENST00000413813 468 ntBASIC2.77□□□□□ -1.97
BEST1O76090 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST1O76090 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST1O76090 MRPL50P4-201ENST00000446432 475 ntBASIC2.77□□□□□ -1.97
BEST1O76090 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST1O76090 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST1O76090 CACYBPP2-201ENST00000453625 678 ntBASIC2.77□□□□□ -1.97
BEST1O76090 MED28P2-201ENST00000475771 317 ntBASIC2.77□□□□□ -1.97
BEST1O76090 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST1O76090 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.77□□□□□ -1.97
BEST1O76090 MTND3P25-201ENST00000509243 135 ntBASIC2.77□□□□□ -1.97
BEST1O76090 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.77□□□□□ -1.97
BEST1O76090 MTND3P5-201ENST00000512798 333 ntBASIC2.77□□□□□ -1.97
BEST1O76090 RNU4-29P-201ENST00000515943 174 ntBASIC2.77□□□□□ -1.97
BEST1O76090 RNU6-1178P-201ENST00000516674 107 ntBASIC2.77□□□□□ -1.97
BEST1O76090 AP003392.2-201ENST00000527269 208 ntBASIC2.77□□□□□ -1.97
BEST1O76090 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.77□□□□□ -1.97
BEST1O76090 AC079598.5-201ENST00000547460 117 ntBASIC2.77□□□□□ -1.97
BEST1O76090 CR383656.8-201ENST00000549046 145 ntBASIC2.77□□□□□ -1.97
BEST1O76090 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST1O76090 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST1O76090 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST1O76090 AC091805.2-201ENST00000603848 235 ntBASIC2.77□□□□□ -1.97
BEST1O76090 AC096772.1-201ENST00000609146 564 ntBASIC2.77□□□□□ -1.97
BEST1O76090 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.77□□□□□ -1.97
BEST1O76090 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.77□□□□□ -1.97
BEST1O76090 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.76□□□□□ -1.97
BEST1O76090 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.76□□□□□ -1.97
BEST1O76090 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.76□□□□□ -1.97
BEST1O76090 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
BEST1O76090 Y_RNA.1-201ENST00000352915 104 ntBASIC2.76□□□□□ -1.97
BEST1O76090 MIR218-1-201ENST00000384999 110 ntBASIC2.76□□□□□ -1.97
BEST1O76090 RNU6-220P-201ENST00000390919 107 ntBASIC2.76□□□□□ -1.97
BEST1O76090 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms