Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CALM1P1-201ENST00000442082 433 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK1BO75841 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK1BO75841 RPS3AP14-201ENST00000483907 780 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 HMGB1P30-201ENST00000492455 606 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 AC097462.2-201ENST00000504623 481 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK1BO75841 AC112206.3-201ENST00000514578 389 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 MTATP6P9-201ENST00000515039 680 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 RNU7-51P-201ENST00000516560 62 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 RNA5SP337-201ENST00000517007 109 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 AP003392.2-201ENST00000527269 208 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 AC011979.2-201ENST00000527568 352 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 OR5AL2P-201ENST00000532185 920 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 AC090888.2-201ENST00000559765 1144 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 MTND1P8-201ENST00000571424 950 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 AL109918.3-201ENST00000603072 338 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 SNRPGP17-201ENST00000603780 214 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 AC018714.1-201ENST00000605028 208 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 Z82243.1-201ENST00000609432 473 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 AL773524.1-201ENST00000614065 229 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 uc_338.15-201ENST00000615470 191 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 YWHAEP7-203ENST00000622054 312 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 AL078595.3-201ENST00000623815 1166 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 AP001002.2-201ENST00000625137 386 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK1BO75841 AC092192.1-201ENST00000633154 1018 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 MIR3529-201ENST00000637713 78 ntBASIC1.54□□□□□ -2.16
UPK1BO75841 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK1BO75841 RNU5E-1-201ENST00000362477 120 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 RNU6-1010P-201ENST00000362757 107 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 SNORD56.2-201ENST00000363242 71 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 RNU6-533P-201ENST00000384144 107 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 RNU6-1274P-201ENST00000384557 107 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
UPK1BO75841 RNU2-48P-201ENST00000410694 191 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 RNU2-32P-201ENST00000411193 191 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AC096664.2-201ENST00000411843 406 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK1BO75841 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK1BO75841 AC007283.2-201ENST00000424739 197 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK1BO75841 USP9YP15-201ENST00000442391 422 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 RPL23AP6-201ENST00000446637 472 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 MTND1P12-201ENST00000455231 147 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK1BO75841 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
UPK1BO75841 AC091965.2-201ENST00000512324 613 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK1BO75841 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK1BO75841 AP005639.2-201ENST00000527592 928 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.53□□□□□ -2.16
UPK1BO75841 AP000763.2-201ENST00000540641 163 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK1BO75841 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK1BO75841 AP000811.1-201ENST00000603803 651 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AC005034.5-201ENST00000604219 466 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AL022154.1-201ENST00000604698 785 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AC105129.3-201ENST00000605455 485 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AP002360.4-201ENST00000606980 481 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AC004908.3-201ENST00000610248 625 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 AL392048.1-201ENST00000613946 534 ntBASIC1.53□□□□□ -2.16
UPK1BO75841 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK1BO75841 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK1BO75841 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UPK1BO75841 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
UPK1BO75841 MIR412-201ENST00000362142 91 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 Y_RNA.40-201ENST00000362645 93 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 SNORD116-20-201ENST00000384529 92 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 GSTA9P-201ENST00000406231 611 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 RNA5SP184-201ENST00000411071 108 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AL158823.1-201ENST00000418441 478 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK1BO75841 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK1BO75841 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK1BO75841 AL627311.1-201ENST00000431514 115 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.52□□□□□ -2.17
UPK1BO75841 AL354941.1-201ENST00000438600 464 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK1BO75841 AL360221.1-201ENST00000445989 335 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK1BO75841 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK1BO75841 AP000797.1-201ENST00000478870 387 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AP001025.1-201ENST00000486139 332 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 SLC25A15P5-201ENST00000508033 253 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.52□□□□□ -2.17
UPK1BO75841 AP004607.1-201ENST00000524456 203 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AP003181.2-201ENST00000528941 181 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AP005435.4-201ENST00000529514 284 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 DUXAP5-201ENST00000529668 529 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK1BO75841 AC022880.1-201ENST00000534017 973 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AC009097.3-201ENST00000563557 1018 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AC104581.2-201ENST00000572227 430 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK1BO75841 AC012360.2-201ENST00000609349 391 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 MIR7106-201ENST00000612419 65 ntBASIC1.52□□□□□ -2.17
UPK1BO75841 AC104010.1-201ENST00000616889 150 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms