Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 FARSBP1-201ENST00000435808 1778 ntBASIC0.86□□□□□ -2.27
SNRNP200O75643 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SNRNP200O75643 Y_RNA.472-201ENST00000384322 102 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 MIR489-201ENST00000384923 84 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 RNU11-3P-201ENST00000391111 133 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 HMGN2P39-201ENST00000398005 273 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SNRNP200O75643 TIMM9P2-201ENST00000419324 266 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 EIF4EP2-201ENST00000422816 654 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AL591704.1-201ENST00000432574 275 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.85□□□□□ -2.27
SNRNP200O75643 MTND1P18-201ENST00000448191 573 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC021382.1-201ENST00000483523 359 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC023194.1-201ENST00000493084 308 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC008628.1-201ENST00000508663 265 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.85□□□□□ -2.27
SNRNP200O75643 AC023632.1-201ENST00000518463 375 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.85□□□□□ -2.27
SNRNP200O75643 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.85□□□□□ -2.27
SNRNP200O75643 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.85□□□□□ -2.27
SNRNP200O75643 AC136443.5-201ENST00000603741 370 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AL445435.1-201ENST00000604232 665 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 PRR13P7-201ENST00000605538 430 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AL354696.1-201ENST00000614652 497 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 DDX43P2-201ENST00000604753 1354 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 MTND5P9-201ENST00000503854 1755 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.85□□□□□ -2.27
SNRNP200O75643 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SNRNP200O75643 RNU6-778P-201ENST00000363269 103 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 RNA5SP212-201ENST00000391223 107 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 RPL21P1-201ENST00000399532 476 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC009310.1-201ENST00000414414 451 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 RPL21P90-201ENST00000415692 466 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AL139421.1-201ENST00000423010 169 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AL353706.1-201ENST00000436728 494 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.85□□□□□ -2.27
SNRNP200O75643 GXYLT1P1-201ENST00000446657 490 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.85□□□□□ -2.27
SNRNP200O75643 AC017099.1-201ENST00000448261 1028 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 MTND1P9-201ENST00000453775 944 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.85□□□□□ -2.27
SNRNP200O75643 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.85□□□□□ -2.27
SNRNP200O75643 SNORA4.4-201ENST00000515921 135 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 RNU6-1102P-201ENST00000516149 96 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 RNU6-1261P-201ENST00000517194 104 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.85□□□□□ -2.27
SNRNP200O75643 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.85□□□□□ -2.27
SNRNP200O75643 AL132857.1-201ENST00000555180 708 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.85□□□□□ -2.27
SNRNP200O75643 AL157871.3-201ENST00000557231 293 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.85□□□□□ -2.27
SNRNP200O75643 BNIP3P23-201ENST00000599655 511 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC068620.3-201ENST00000602749 560 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
SNRNP200O75643 AC013476.2-201ENST00000614456 459 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.85□□□□□ -2.27
SNRNP200O75643 AC007490.1-201ENST00000624321 703 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 AC018630.2-201ENST00000534866 2403 ntBASIC0.85□□□□□ -2.27
SNRNP200O75643 RNU6-1122P-201ENST00000384449 107 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 MIR1283-2-201ENST00000408621 87 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.84□□□□□ -2.27
SNRNP200O75643 TOMM22P2-201ENST00000430735 237 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.84□□□□□ -2.27
SNRNP200O75643 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.84□□□□□ -2.27
SNRNP200O75643 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.84□□□□□ -2.27
SNRNP200O75643 ELOCP30-201ENST00000447108 299 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 SEPT14P24-201ENST00000447236 180 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.84□□□□□ -2.27
SNRNP200O75643 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.84□□□□□ -2.27
SNRNP200O75643 OR2A41P-201ENST00000473586 105 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 AP001025.1-201ENST00000486139 332 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 AC139453.3-201ENST00000493276 369 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.84□□□□□ -2.27
SNRNP200O75643 AC079395.1-201ENST00000510981 262 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 RNA5SP216-201ENST00000516111 123 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 AP001189.2-201ENST00000527320 189 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.84□□□□□ -2.27
SNRNP200O75643 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.84□□□□□ -2.27
SNRNP200O75643 MIR5000-201ENST00000577717 103 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.84□□□□□ -2.27
SNRNP200O75643 MIR1322-201ENST00000638013 71 ntBASIC0.84□□□□□ -2.27
SNRNP200O75643 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.84□□□□□ -2.28
SNRNP200O75643 Y_RNA.269-201ENST00000364685 89 ntBASIC0.83□□□□□ -2.28
SNRNP200O75643 RNU6-338P-201ENST00000383888 105 ntBASIC0.83□□□□□ -2.28
SNRNP200O75643 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.83□□□□□ -2.28
SNRNP200O75643 RPS27P16-201ENST00000425758 201 ntBASIC0.83□□□□□ -2.28
SNRNP200O75643 FABP5P14-201ENST00000437273 393 ntBASIC0.83□□□□□ -2.28
SNRNP200O75643 AC005094.1-201ENST00000440420 368 ntBASIC0.83□□□□□ -2.28
SNRNP200O75643 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
SNRNP200O75643 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
SNRNP200O75643 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.83□□□□□ -2.28
SNRNP200O75643 SNORA25.11-201ENST00000515935 105 ntBASIC0.83□□□□□ -2.28
SNRNP200O75643 SNORA31.19-201ENST00000517079 126 ntBASIC0.83□□□□□ -2.28
SNRNP200O75643 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.83□□□□□ -2.28
SNRNP200O75643 CYCSP27-201ENST00000527643 293 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms