Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
LDB3O75112 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.97□□□□□ -1.93
LDB3O75112 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LDB3O75112 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
LDB3O75112 AL355596.1-201ENST00000565399 3996 ntBASIC2.97□□□□□ -1.93
LDB3O75112 RNU6-1167P-201ENST00000363227 94 ntBASIC2.97□□□□□ -1.93
LDB3O75112 RNU6-1188P-201ENST00000363795 107 ntBASIC2.97□□□□□ -1.93
LDB3O75112 RNU6-741P-201ENST00000383889 107 ntBASIC2.97□□□□□ -1.93
LDB3O75112 Y_RNA.395-201ENST00000383945 109 ntBASIC2.97□□□□□ -1.93
LDB3O75112 RNA5SP111-201ENST00000411386 101 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LDB3O75112 MTCO2P27-201ENST00000420740 428 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AL590632.1-201ENST00000424289 371 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AL669831.1-202ENST00000428504 417 ntBASIC2.97□□□□□ -1.93
LDB3O75112 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.97□□□□□ -1.93
LDB3O75112 AC092573.2-201ENST00000434546 243 ntBASIC2.97□□□□□ -1.93
LDB3O75112 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AC117503.1-201ENST00000472241 394 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AC090096.1-201ENST00000489168 390 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AC009901.1-201ENST00000506703 541 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
LDB3O75112 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.97□□□□□ -1.93
LDB3O75112 PHBP14-201ENST00000512887 367 ntBASIC2.97□□□□□ -1.93
LDB3O75112 SNORA31.1-201ENST00000515993 133 ntBASIC2.97□□□□□ -1.93
LDB3O75112 SNORA31.5-201ENST00000516190 133 ntBASIC2.97□□□□□ -1.93
LDB3O75112 RNA5SP291-201ENST00000517222 105 ntBASIC2.97□□□□□ -1.93
LDB3O75112 RNU6-711P-201ENST00000517255 106 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AC090115.3-201ENST00000553218 849 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.97□□□□□ -1.93
LDB3O75112 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.97□□□□□ -1.93
LDB3O75112 MIR5047-201ENST00000579212 100 ntBASIC2.97□□□□□ -1.93
LDB3O75112 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.97□□□□□ -1.93
LDB3O75112 AC016925.2-201ENST00000605108 242 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AC019193.3-201ENST00000609144 554 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AL138880.2-201ENST00000616214 239 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AC103705.1-201ENST00000619013 241 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AC092628.2-201ENST00000622492 339 ntBASIC2.97□□□□□ -1.93
LDB3O75112 AC018692.3-201ENST00000623929 123 ntBASIC2.97□□□□□ -1.93
LDB3O75112 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LDB3O75112 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
LDB3O75112 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
LDB3O75112 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
LDB3O75112 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LDB3O75112 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.96□□□□□ -1.94
LDB3O75112 SNORA38.1-201ENST00000364172 131 ntBASIC2.96□□□□□ -1.94
LDB3O75112 SNORA70.4-201ENST00000365509 134 ntBASIC2.96□□□□□ -1.94
LDB3O75112 RNU6-805P-201ENST00000365643 106 ntBASIC2.96□□□□□ -1.94
LDB3O75112 RNU6-574P-201ENST00000384265 107 ntBASIC2.96□□□□□ -1.94
LDB3O75112 SNORD70.1-201ENST00000391007 85 ntBASIC2.96□□□□□ -1.94
LDB3O75112 RNU2-33P-201ENST00000410344 192 ntBASIC2.96□□□□□ -1.94
LDB3O75112 RNU4-47P-201ENST00000410876 114 ntBASIC2.96□□□□□ -1.94
LDB3O75112 RPL37P10-201ENST00000412884 288 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB3O75112 AC245291.1-201ENST00000419501 328 ntBASIC2.96□□□□□ -1.94
LDB3O75112 ARF4P2-201ENST00000430209 526 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AL591704.1-201ENST00000432574 275 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AL353705.1-201ENST00000433468 480 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.96□□□□□ -1.94
LDB3O75112 FABP5P14-201ENST00000437273 393 ntBASIC2.96□□□□□ -1.94
LDB3O75112 MTND1P17-201ENST00000448961 204 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AC107399.1-201ENST00000451226 265 ntBASIC2.96□□□□□ -1.94
LDB3O75112 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB3O75112 AC104472.2-201ENST00000469035 601 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB3O75112 RNU6-189P-201ENST00000516120 101 ntBASIC2.96□□□□□ -1.94
LDB3O75112 RNU6-143P-201ENST00000516942 93 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB3O75112 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB3O75112 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.96□□□□□ -1.94
LDB3O75112 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.96□□□□□ -1.94
LDB3O75112 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB3O75112 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.96□□□□□ -1.94
LDB3O75112 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB3O75112 AC138761.3-201ENST00000579993 334 ntBASIC2.96□□□□□ -1.94
LDB3O75112 UBL5P2-201ENST00000583788 219 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AC023043.2-201ENST00000589678 1026 ntBASIC2.96□□□□□ -1.94
LDB3O75112 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.96□□□□□ -1.94
LDB3O75112 AC098826.3-201ENST00000603823 466 ntBASIC2.96□□□□□ -1.94
LDB3O75112 HSPE1P7-201ENST00000604681 321 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AP000942.4-201ENST00000604811 241 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB3O75112 AL355802.3-201ENST00000607571 545 ntBASIC2.96□□□□□ -1.94
LDB3O75112 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AL591516.1-201ENST00000611326 274 ntBASIC2.96□□□□□ -1.94
LDB3O75112 AL138726.1-201ENST00000614873 333 ntBASIC2.96□□□□□ -1.94
LDB3O75112 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.96□□□□□ -1.94
LDB3O75112 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.96□□□□□ -1.94
LDB3O75112 MIR7153-201ENST00000637758 57 ntBASIC2.96□□□□□ -1.94
LDB3O75112 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
LDB3O75112 ZNF519P1-201ENST00000449011 1626 ntBASIC2.96□□□□□ -1.94
LDB3O75112 SRP72P2-201ENST00000344851 1979 ntBASIC2.96□□□□□ -1.94
LDB3O75112 MTND4P1-201ENST00000457501 1466 ntBASIC2.96□□□□□ -1.94
LDB3O75112 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LDB3O75112 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
LDB3O75112 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
LDB3O75112 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.95□□□□□ -1.94
LDB3O75112 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.95□□□□□ -1.94
LDB3O75112 RNA5SP383-201ENST00000362934 120 ntBASIC2.95□□□□□ -1.94
LDB3O75112 Y_RNA.135-201ENST00000363439 95 ntBASIC2.95□□□□□ -1.94
LDB3O75112 SNORD113-7-201ENST00000363762 77 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms