Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.86□□□□□ -1.95
ZIC3O60481 HMGB1P18-201ENST00000438801 619 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 AC115115.1-201ENST00000449927 248 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 RNU7-138P-201ENST00000459479 64 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 AC008549.1-201ENST00000512900 643 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.86□□□□□ -1.95
ZIC3O60481 AC069113.1-201ENST00000517763 267 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 AC087854.1-201ENST00000519706 414 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 AC105029.1-201ENST00000520250 669 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 IGHV3-76-201ENST00000522465 295 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 AP000867.2-201ENST00000532468 320 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.86□□□□□ -1.95
ZIC3O60481 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.86□□□□□ -1.95
ZIC3O60481 MIR4782-201ENST00000577987 79 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 MIR3200-201ENST00000580767 85 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 UBL5P2-201ENST00000583788 219 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.86□□□□□ -1.95
ZIC3O60481 AC023043.2-201ENST00000589678 1026 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.86□□□□□ -1.95
ZIC3O60481 AL138726.1-201ENST00000614873 333 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ZIC3O60481 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ZIC3O60481 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
ZIC3O60481 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
ZIC3O60481 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ZIC3O60481 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ZIC3O60481 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZIC3O60481 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.85□□□□□ -1.95
ZIC3O60481 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.85□□□□□ -1.95
ZIC3O60481 MTND5P7-201ENST00000413558 1798 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ZIC3O60481 RNU6-797P-201ENST00000363101 109 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ZIC3O60481 Y_RNA.529-201ENST00000384586 119 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
ZIC3O60481 RNA5SP252-201ENST00000391131 119 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.85□□□□□ -1.95
ZIC3O60481 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.85□□□□□ -1.95
ZIC3O60481 PGBD4P6-201ENST00000421501 610 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 HMGB1P9-201ENST00000429856 646 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.85□□□□□ -1.95
ZIC3O60481 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.85□□□□□ -1.95
ZIC3O60481 CYCSP32-201ENST00000440548 321 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 AC098831.1-201ENST00000440661 216 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 RPL32P28-201ENST00000443577 397 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 RPL37P4-201ENST00000448908 268 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 RPS4XP22-201ENST00000480755 780 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.85□□□□□ -1.95
ZIC3O60481 AC026801.1-201ENST00000497178 464 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.85□□□□□ -1.95
ZIC3O60481 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.85□□□□□ -1.95
ZIC3O60481 SNORA31.1-201ENST00000515993 133 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 SNORA31.5-201ENST00000516190 133 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 SCARNA20.6-201ENST00000517251 106 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 AC104027.1-201ENST00000521887 300 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.85□□□□□ -1.95
ZIC3O60481 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.85□□□□□ -1.95
ZIC3O60481 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.85□□□□□ -1.95
ZIC3O60481 AC005668.1-201ENST00000571142 476 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.85□□□□□ -1.95
ZIC3O60481 MTND4LP5-201ENST00000605152 292 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 AC123912.5-201ENST00000605470 343 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 RNU6-85P-201ENST00000605989 107 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 AL132765.2-201ENST00000610812 351 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.85□□□□□ -1.95
ZIC3O60481 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 AC006111.3-201ENST00000622137 383 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 SNORA50A-202ENST00000629536 136 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.85□□□□□ -1.95
ZIC3O60481 MIR622-201ENST00000638396 96 ntBASIC2.85□□□□□ -1.95
ZIC3O60481 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZIC3O60481 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZIC3O60481 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.85□□□□□ -1.95
ZIC3O60481 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.85□□□□□ -1.95
ZIC3O60481 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.84□□□□□ -1.95
ZIC3O60481 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.84□□□□□ -1.95
ZIC3O60481 Y_RNA.339-201ENST00000365325 102 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 RNU6-128P-201ENST00000383976 107 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 MIR518D-201ENST00000385014 87 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 MT-TD-201ENST00000387419 68 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 EI24P2-201ENST00000397776 1076 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 RPL5P18-201ENST00000406671 891 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 RAP1BP3-201ENST00000407180 549 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 RPS15AP6-201ENST00000420703 385 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 BPY2DP-201ENST00000422208 265 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.84□□□□□ -1.95
ZIC3O60481 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.84□□□□□ -1.95
ZIC3O60481 AL359672.1-201ENST00000442302 409 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.84□□□□□ -1.95
ZIC3O60481 RPL26P9-201ENST00000457466 433 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 AC006445.1-201ENST00000491925 405 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 MTND3P22-201ENST00000510932 243 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 RNU6-1332P-201ENST00000516666 104 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 AP005597.4-201ENST00000526762 229 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.84□□□□□ -1.95
ZIC3O60481 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.84□□□□□ -1.95
ZIC3O60481 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.84□□□□□ -1.95
ZIC3O60481 LINC00933-203ENST00000559812 219 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms