Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL442067.2-201ENST00000614033 363 ntBASIC3.48□□□□□ -1.85
FOXN3O00409 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.48□□□□□ -1.85
FOXN3O00409 AC103705.1-201ENST00000619013 241 ntBASIC3.48□□□□□ -1.85
FOXN3O00409 TPTEP1-208ENST00000636884 213 ntBASIC3.48□□□□□ -1.85
FOXN3O00409 Z83843.1-201ENST00000604070 3685 ntBASIC3.48□□□□□ -1.85
FOXN3O00409 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXN3O00409 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.48□□□□□ -1.85
FOXN3O00409 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXN3O00409 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXN3O00409 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXN3O00409 AC121333.1-201ENST00000567488 2709 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXN3O00409 AC138393.1-203ENST00000327086 343 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 RNU4-79P-201ENST00000362764 141 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 RNU6-799P-201ENST00000363567 107 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 Z98749.2-208ENST00000381646 500 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 Y_RNA.480-201ENST00000384364 102 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 RNU2-3P-201ENST00000410144 191 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 AC245291.1-201ENST00000419501 328 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 ATG3P1-201ENST00000419507 911 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 HMGB1P9-201ENST00000429856 646 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 AC097713.2-201ENST00000430199 356 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 RPS15AP5-201ENST00000436276 388 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXN3O00409 CYCSP35-201ENST00000451978 304 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 AC011005.2-201ENST00000487324 359 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXN3O00409 RNU4-49P-201ENST00000516080 140 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 SNORA14.1-201ENST00000516113 141 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 RNU6-581P-201ENST00000516214 105 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 Y_RNA.701-201ENST00000516812 110 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 NACAP3-201ENST00000552100 481 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 LINC00933-203ENST00000559812 219 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXN3O00409 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXN3O00409 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXN3O00409 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.47□□□□□ -1.85
FOXN3O00409 AL451007.1-201ENST00000595491 289 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 AC011890.2-201ENST00000613393 294 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 AC004852.3-201ENST00000614131 326 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 AC091903.1-201ENST00000624322 454 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 MIR3199-2-201ENST00000636243 86 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.47□□□□□ -1.85
FOXN3O00409 MIR7153-201ENST00000637758 57 ntBASIC3.47□□□□□ -1.85
FOXN3O00409 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.47□□□□□ -1.85
FOXN3O00409 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
FOXN3O00409 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
FOXN3O00409 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
FOXN3O00409 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 Y_RNA.167-201ENST00000363735 109 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 MIR23A-201ENST00000385245 73 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 EIF4E2P1-201ENST00000393781 255 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 BPY2DP-201ENST00000422208 265 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 AC005019.1-201ENST00000436455 431 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
FOXN3O00409 AL358232.1-201ENST00000448030 501 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 MTND4P17-201ENST00000470444 350 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 SNORA31.21-201ENST00000517180 77 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 AC087241.2-201ENST00000535801 324 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.46□□□□□ -1.86
FOXN3O00409 PSMA3P-201ENST00000555485 635 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 AL121821.2-201ENST00000556081 394 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 AC026464.5-201ENST00000562497 722 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.46□□□□□ -1.86
FOXN3O00409 AC005668.1-201ENST00000571142 476 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 MIR2682-201ENST00000580305 110 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 RNU6-85P-201ENST00000605989 107 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 AL050343.2-201ENST00000607338 280 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.46□□□□□ -1.86
FOXN3O00409 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 AC090574.1-201ENST00000623186 233 ntBASIC3.46□□□□□ -1.86
FOXN3O00409 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.46□□□□□ -1.86
FOXN3O00409 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.45□□□□□ -1.86
FOXN3O00409 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.45□□□□□ -1.86
FOXN3O00409 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-37P-201ENST00000362692 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNA5SP383-201ENST00000362934 120 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-11P-201ENST00000364234 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-7-201ENST00000364784 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-8-201ENST00000365467 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 XGY1-201ENST00000381172 446 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-25P-201ENST00000383873 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-1-201ENST00000383898 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-48P-201ENST00000384161 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-36P-201ENST00000384172 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-4P-201ENST00000384205 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-5P-201ENST00000384238 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-3P-201ENST00000384314 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-16P-201ENST00000384385 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-15P-201ENST00000384534 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-2-201ENST00000384627 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-29P-201ENST00000384637 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-9-201ENST00000384776 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-33P-201ENST00000384793 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 MIR183-201ENST00000384958 110 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 MIR767-201ENST00000390228 109 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
FOXN3O00409 RPL7P10-201ENST00000417407 739 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms