Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 HMGB1P30-201ENST00000492455 606 ntBASIC2.33□□□□□ -2.04
SLC28A1O00337 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC28A1O00337 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.33□□□□□ -2.04
SLC28A1O00337 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC28A1O00337 AC079598.5-201ENST00000547460 117 ntBASIC2.33□□□□□ -2.04
SLC28A1O00337 MIR3913-1-201ENST00000577744 102 ntBASIC2.33□□□□□ -2.04
SLC28A1O00337 LARP7P3-201ENST00000579888 337 ntBASIC2.33□□□□□ -2.04
SLC28A1O00337 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.33□□□□□ -2.04
SLC28A1O00337 AC068790.2-201ENST00000602601 557 ntBASIC2.33□□□□□ -2.04
SLC28A1O00337 Z84480.1-201ENST00000605131 311 ntBASIC2.33□□□□□ -2.04
SLC28A1O00337 AC067747.1-201ENST00000608026 250 ntBASIC2.33□□□□□ -2.04
SLC28A1O00337 AL137847.3-201ENST00000611521 109 ntBASIC2.33□□□□□ -2.04
SLC28A1O00337 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.33□□□□□ -2.04
SLC28A1O00337 AP001486.3-201ENST00000615334 372 ntBASIC2.33□□□□□ -2.04
SLC28A1O00337 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SLC28A1O00337 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.33□□□□□ -2.04
SLC28A1O00337 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.33□□□□□ -2.04
SLC28A1O00337 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SLC28A1O00337 RNU6-371P-201ENST00000364283 108 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 RNU6-456P-201ENST00000384493 107 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SLC28A1O00337 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SLC28A1O00337 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC28A1O00337 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC28A1O00337 NUP35P1-201ENST00000422734 947 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.32□□□□□ -2.04
SLC28A1O00337 SUMO1P4-201ENST00000429430 302 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC28A1O00337 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC28A1O00337 USP9YP29-201ENST00000445112 563 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AC079448.1-201ENST00000449377 373 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AC022364.2-201ENST00000457963 554 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 RNU6-956P-201ENST00000458868 103 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 RNU7-182P-201ENST00000459009 62 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC28A1O00337 DYNLL1P5-201ENST00000467158 270 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 ARL2BPP4-201ENST00000506854 471 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AC117522.2-201ENST00000510049 657 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.32□□□□□ -2.04
SLC28A1O00337 SNORD27.1-201ENST00000516319 72 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.32□□□□□ -2.04
SLC28A1O00337 AC135279.1-201ENST00000543493 504 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC28A1O00337 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC28A1O00337 AC074050.1-201ENST00000563247 211 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 MIR3200-201ENST00000580767 85 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 MIR5194-201ENST00000582634 120 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC28A1O00337 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC28A1O00337 AC087752.4-201ENST00000605911 462 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AC096772.1-201ENST00000609146 564 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 AC011155.2-201ENST00000623202 216 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC28A1O00337 SEPT14P19-203ENST00000633205 211 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 MIR3529-201ENST00000637713 78 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
SLC28A1O00337 AL390237.1-201ENST00000404226 1415 ntBASIC2.32□□□□□ -2.04
SLC28A1O00337 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SLC28A1O00337 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
SLC28A1O00337 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.31□□□□□ -2.04
SLC28A1O00337 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SLC28A1O00337 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SLC28A1O00337 RNU6-384P-201ENST00000364900 104 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 RNU6-282P-201ENST00000365357 103 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 RNU6-550P-201ENST00000391057 101 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 AL359511.1-201ENST00000402970 211 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC28A1O00337 AC003685.2-201ENST00000422795 395 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC28A1O00337 AC000111.3-201ENST00000433478 193 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 AL031667.1-201ENST00000440222 725 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 CALM1P1-201ENST00000442082 433 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC28A1O00337 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC28A1O00337 RNA5SP503-201ENST00000517047 117 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 OR4R1P-201ENST00000529879 463 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 AP000873.5-201ENST00000533906 236 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 AC087241.2-201ENST00000535801 324 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC28A1O00337 RPS15AP11-201ENST00000594193 385 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 BNIP3P30-201ENST00000601184 574 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 AC006386.2-201ENST00000624491 75 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 AC012005.1-201ENST00000624575 75 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 MIR1291-201ENST00000627649 87 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SLC28A1O00337 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SLC28A1O00337 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.31□□□□□ -2.04
SLC28A1O00337 RBBP8P1-201ENST00000449447 1844 ntBASIC2.31□□□□□ -2.04
SLC28A1O00337 AC069528.2-201ENST00000624849 1991 ntBASIC2.3□□□□□ -2.04
SLC28A1O00337 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SLC28A1O00337 OR56A5-201ENST00000340110 738 ntBASIC2.3□□□□□ -2.04
SLC28A1O00337 RNU6-942P-201ENST00000363002 107 ntBASIC2.3□□□□□ -2.04
SLC28A1O00337 RNU6-181P-201ENST00000363225 107 ntBASIC2.3□□□□□ -2.04
SLC28A1O00337 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
SLC28A1O00337 MIR196B-201ENST00000384852 84 ntBASIC2.3□□□□□ -2.04
SLC28A1O00337 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.3□□□□□ -2.04
SLC28A1O00337 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms