Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RNU4-5P-201ENST00000607255 135 ntBASIC1.66□□□□□ -2.14
DFFAO00273 AL157392.4-201ENST00000609756 345 ntBASIC1.66□□□□□ -2.14
DFFAO00273 AP000720.1-201ENST00000625091 483 ntBASIC1.66□□□□□ -2.14
DFFAO00273 ZNF876P-202ENST00000398732 1485 ntBASIC1.66□□□□□ -2.14
DFFAO00273 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
DFFAO00273 RNY4P24-201ENST00000362735 96 ntBASIC1.65□□□□□ -2.15
DFFAO00273 RNU1-23P-201ENST00000363361 144 ntBASIC1.65□□□□□ -2.15
DFFAO00273 RNU6-234P-201ENST00000365229 104 ntBASIC1.65□□□□□ -2.15
DFFAO00273 RNY3P13-201ENST00000365542 102 ntBASIC1.65□□□□□ -2.15
DFFAO00273 MIR122-201ENST00000385044 85 ntBASIC1.65□□□□□ -2.15
DFFAO00273 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
DFFAO00273 RNU2-36P-201ENST00000410361 191 ntBASIC1.65□□□□□ -2.15
DFFAO00273 RNU6-1025P-201ENST00000410629 104 ntBASIC1.65□□□□□ -2.15
DFFAO00273 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.65□□□□□ -2.15
DFFAO00273 AC092648.1-201ENST00000425870 423 ntBASIC1.65□□□□□ -2.15
DFFAO00273 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.65□□□□□ -2.15
DFFAO00273 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.65□□□□□ -2.15
DFFAO00273 USP9YP25-201ENST00000457708 443 ntBASIC1.65□□□□□ -2.15
DFFAO00273 SNORD13-201ENST00000459299 104 ntBASIC1.65□□□□□ -2.15
DFFAO00273 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.65□□□□□ -2.15
DFFAO00273 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.65□□□□□ -2.15
DFFAO00273 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.65□□□□□ -2.15
DFFAO00273 RNU6-914P-201ENST00000516749 109 ntBASIC1.65□□□□□ -2.15
DFFAO00273 RNU6-677P-201ENST00000516914 101 ntBASIC1.65□□□□□ -2.15
DFFAO00273 AC105185.1-201ENST00000518705 535 ntBASIC1.65□□□□□ -2.15
DFFAO00273 OR5B19P-201ENST00000531766 928 ntBASIC1.65□□□□□ -2.15
DFFAO00273 CBX3P4-201ENST00000538909 354 ntBASIC1.65□□□□□ -2.15
DFFAO00273 AL157871.3-201ENST00000557231 293 ntBASIC1.65□□□□□ -2.15
DFFAO00273 AC136619.2-201ENST00000563361 631 ntBASIC1.65□□□□□ -2.15
DFFAO00273 MIR3146-201ENST00000580367 79 ntBASIC1.65□□□□□ -2.15
DFFAO00273 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
DFFAO00273 AC022893.3-201ENST00000607665 437 ntBASIC1.65□□□□□ -2.15
DFFAO00273 AC108747.1-201ENST00000609508 535 ntBASIC1.65□□□□□ -2.15
DFFAO00273 MIR7843-201ENST00000622274 79 ntBASIC1.65□□□□□ -2.15
DFFAO00273 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
DFFAO00273 AC103710.2-202ENST00000641454 2853 ntBASIC1.65□□□□□ -2.15
DFFAO00273 Y_RNA.46-201ENST00000362695 102 ntBASIC1.64□□□□□ -2.15
DFFAO00273 RNU6-511P-201ENST00000363496 107 ntBASIC1.64□□□□□ -2.15
DFFAO00273 SNORA4.3-201ENST00000365564 137 ntBASIC1.64□□□□□ -2.15
DFFAO00273 MIR518A2-201ENST00000384966 87 ntBASIC1.64□□□□□ -2.15
DFFAO00273 RNU2-62P-201ENST00000410868 191 ntBASIC1.64□□□□□ -2.15
DFFAO00273 SNORD56-201ENST00000413522 71 ntBASIC1.64□□□□□ -2.15
DFFAO00273 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.64□□□□□ -2.15
DFFAO00273 DNAJC19P4-201ENST00000440115 345 ntBASIC1.64□□□□□ -2.15
DFFAO00273 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.64□□□□□ -2.15
DFFAO00273 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.64□□□□□ -2.15
DFFAO00273 AC003071.1-201ENST00000451219 789 ntBASIC1.64□□□□□ -2.15
DFFAO00273 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.64□□□□□ -2.15
DFFAO00273 AC109927.2-201ENST00000506416 303 ntBASIC1.64□□□□□ -2.15
DFFAO00273 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.64□□□□□ -2.15
DFFAO00273 MTATP6P15-201ENST00000527233 835 ntBASIC1.64□□□□□ -2.15
DFFAO00273 AP005639.2-201ENST00000527592 928 ntBASIC1.64□□□□□ -2.15
DFFAO00273 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.64□□□□□ -2.15
DFFAO00273 NDUFA5P6-201ENST00000542110 379 ntBASIC1.64□□□□□ -2.15
DFFAO00273 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.64□□□□□ -2.15
DFFAO00273 AC023050.2-201ENST00000544968 387 ntBASIC1.64□□□□□ -2.15
DFFAO00273 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.64□□□□□ -2.15
DFFAO00273 MIR3683-201ENST00000580847 82 ntBASIC1.64□□□□□ -2.15
DFFAO00273 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.64□□□□□ -2.15
DFFAO00273 AL391813.2-201ENST00000609113 322 ntBASIC1.64□□□□□ -2.15
DFFAO00273 AC096772.1-201ENST00000609146 564 ntBASIC1.64□□□□□ -2.15
DFFAO00273 AC068944.2-201ENST00000610373 403 ntBASIC1.64□□□□□ -2.15
DFFAO00273 uc_338.12-201ENST00000616344 181 ntBASIC1.64□□□□□ -2.15
DFFAO00273 FRG1KP-201ENST00000623592 341 ntBASIC1.64□□□□□ -2.15
DFFAO00273 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.64□□□□□ -2.15
DFFAO00273 AP006437.1-201ENST00000641440 3685 ntBASIC1.63□□□□□ -2.15
DFFAO00273 RNU6-1032P-201ENST00000384100 107 ntBASIC1.63□□□□□ -2.15
DFFAO00273 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.63□□□□□ -2.15
DFFAO00273 TOMM20P4-201ENST00000427861 435 ntBASIC1.63□□□□□ -2.15
DFFAO00273 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.63□□□□□ -2.15
DFFAO00273 USP9YP24-201ENST00000434374 697 ntBASIC1.63□□□□□ -2.15
DFFAO00273 MTND6P13-201ENST00000443510 523 ntBASIC1.63□□□□□ -2.15
DFFAO00273 USP9YP17-201ENST00000444617 696 ntBASIC1.63□□□□□ -2.15
DFFAO00273 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.63□□□□□ -2.15
DFFAO00273 KATNBL1P6-201ENST00000453433 915 ntBASIC1.63□□□□□ -2.15
DFFAO00273 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.63□□□□□ -2.15
DFFAO00273 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.63□□□□□ -2.15
DFFAO00273 BZW1P2-201ENST00000473537 826 ntBASIC1.63□□□□□ -2.15
DFFAO00273 AC104685.1-201ENST00000502445 371 ntBASIC1.63□□□□□ -2.15
DFFAO00273 AC020699.1-201ENST00000505161 445 ntBASIC1.63□□□□□ -2.15
DFFAO00273 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.63□□□□□ -2.15
DFFAO00273 AC091965.2-201ENST00000512324 613 ntBASIC1.63□□□□□ -2.15
DFFAO00273 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.63□□□□□ -2.15
DFFAO00273 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.63□□□□□ -2.15
DFFAO00273 SNORA31.23-201ENST00000517219 133 ntBASIC1.63□□□□□ -2.15
DFFAO00273 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.63□□□□□ -2.15
DFFAO00273 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.63□□□□□ -2.15
DFFAO00273 AC026271.5-201ENST00000577873 130 ntBASIC1.63□□□□□ -2.15
DFFAO00273 MIR4509-3-201ENST00000578671 94 ntBASIC1.63□□□□□ -2.15
DFFAO00273 MIR4307-201ENST00000582802 84 ntBASIC1.63□□□□□ -2.15
DFFAO00273 MIR4509-2-201ENST00000583920 94 ntBASIC1.63□□□□□ -2.15
DFFAO00273 AP000860.1-201ENST00000605250 559 ntBASIC1.63□□□□□ -2.15
DFFAO00273 AC018638.7-201ENST00000605836 1114 ntBASIC1.63□□□□□ -2.15
DFFAO00273 AC106052.1-201ENST00000608029 497 ntBASIC1.63□□□□□ -2.15
DFFAO00273 AC130324.3-201ENST00000614165 542 ntBASIC1.63□□□□□ -2.15
DFFAO00273 MIR4509-1-201ENST00000618224 94 ntBASIC1.63□□□□□ -2.15
DFFAO00273 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
DFFAO00273 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
DFFAO00273 MTND4P16-201ENST00000466108 1367 ntBASIC1.62□□□□□ -2.15
DFFAO00273 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms