Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC188H7C350 BX276092.3-201ENST00000424182 230 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 AL365400.1-201ENST00000431854 640 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 AL596276.1-201ENST00000434465 418 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC188H7C350 AL031667.1-201ENST00000440222 725 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC188H7C350 AL135938.1-201ENST00000443141 297 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC188H7C350 HIGD1AP2-201ENST00000446367 280 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 RNU7-26P-201ENST00000458980 63 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 AC011825.1-201ENST00000484967 388 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 MRPL42P6-201ENST00000486397 371 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 AC011005.2-201ENST00000487324 359 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 CKS1BP2-201ENST00000497342 240 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 AIG1P1-201ENST00000503376 148 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC188H7C350 SNORD27.1-201ENST00000516319 72 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC188H7C350 EIF4BP1-201ENST00000554881 351 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC188H7C350 AC069294.1-201ENST00000608397 350 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC188H7C350 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC188H7C350 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC188H7C350 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC188H7C350 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC188H7C350 AL109809.4-201ENST00000603520 2185 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CCDC188H7C350 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC188H7C350 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CCDC188H7C350 HSPA8P4-201ENST00000511877 1920 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC188H7C350 SNORD62.1-201ENST00000362541 86 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 RNU5A-6P-201ENST00000384136 116 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 SNORA41-201ENST00000384675 132 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 MIR518D-201ENST00000385014 87 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 MTATP6P18-201ENST00000417994 673 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 MTCO2P11-201ENST00000431069 680 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC188H7C350 AC000111.3-201ENST00000433478 193 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC188H7C350 AC006026.2-201ENST00000457376 180 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 AC112771.1-201ENST00000463581 102 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 AC090096.1-201ENST00000489168 390 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC188H7C350 MIR892C-201ENST00000516410 77 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC188H7C350 OR5AQ1P-201ENST00000527596 927 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 AC087241.2-201ENST00000535801 324 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC188H7C350 AC105245.1-201ENST00000581934 244 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 AC093732.2-201ENST00000607950 274 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 AL449363.1-201ENST00000617815 186 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 SCARNA4-202ENST00000625402 129 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC188H7C350 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC188H7C350 Z75746.1-201ENST00000440243 2080 ntBASIC2.6□□□□□ -1.99
CCDC188H7C350 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC188H7C350 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC188H7C350 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC188H7C350 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC188H7C350 RNU6-7-201ENST00000364784 107 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 RNU6-8-201ENST00000365467 107 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 RNU6-72P-201ENST00000384285 79 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC188H7C350 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC188H7C350 MTCYBP5-201ENST00000423752 1135 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 RPL30P4-201ENST00000429309 333 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC188H7C350 AC002486.1-201ENST00000435098 391 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AC004383.1-201ENST00000438135 289 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 RPL7P12-201ENST00000446719 750 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 Z83846.1-201ENST00000446798 265 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AL360271.2-201ENST00000447710 161 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC188H7C350 NDUFB1P2-201ENST00000449477 176 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 RNU7-63P-201ENST00000459054 62 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 MED28P2-201ENST00000475771 317 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AC096576.1-201ENST00000489014 359 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AC097462.2-201ENST00000504623 481 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC188H7C350 AC079140.3-201ENST00000511111 550 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC188H7C350 SMURF2P1-201ENST00000514992 481 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 Y_RNA.687-201ENST00000516558 91 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AC109329.2-201ENST00000519658 482 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC188H7C350 AP003392.2-201ENST00000527269 208 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AC022080.3-201ENST00000544433 482 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AC009163.5-201ENST00000575421 637 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 MIR4775-201ENST00000581168 75 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC188H7C350 BNIP3P30-201ENST00000601184 574 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 ATP1B3P1-201ENST00000605365 821 ntBASIC2.59□□□□□ -1.99
CCDC188H7C350 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC188H7C350 AC026585.1-201ENST00000619582 524 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms