Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RNA5SP404-201ENST00000517118 132 ntBASIC0.36□□□□□ -2.35
CNOT1A5YKK6 Y_RNA.757-201ENST00000578934 114 ntBASIC0.36□□□□□ -2.35
CNOT1A5YKK6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.36□□□□□ -2.35
CNOT1A5YKK6 AC008498.1-201ENST00000613012 531 ntBASIC0.36□□□□□ -2.35
CNOT1A5YKK6 AL357075.2-201ENST00000614906 189 ntBASIC0.36□□□□□ -2.35
CNOT1A5YKK6 AC090116.1-201ENST00000615679 446 ntBASIC0.36□□□□□ -2.35
CNOT1A5YKK6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CNOT1A5YKK6 RNU6-270P-201ENST00000364131 105 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 RPS15AP5-201ENST00000436276 388 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AC087477.1-201ENST00000465747 340 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 SNORD116-28-201ENST00000516123 91 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 SNORA31.6-201ENST00000516241 130 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 RNA5SP137-201ENST00000516833 135 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AP003122.4-201ENST00000530980 758 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 MIR5190-201ENST00000581537 80 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AP001180.6-201ENST00000584918 159 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 BNIP3P16-201ENST00000589779 534 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AC004492.1-201ENST00000607036 742 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AC006213.4-201ENST00000616184 634 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 RNU6-251P-201ENST00000363235 104 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 RNU6-271P-201ENST00000363858 105 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AL606490.4-201ENST00000423117 127 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AC067940.1-201ENST00000458411 300 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AC006512.1-201ENST00000468816 291 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.35□□□□□ -2.35
CNOT1A5YKK6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 MIR8065-201ENST00000620577 100 ntBASIC0.35□□□□□ -2.35
CNOT1A5YKK6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.34□□□□□ -2.35
CNOT1A5YKK6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.34□□□□□ -2.35
CNOT1A5YKK6 AC097499.1-201ENST00000444277 208 ntBASIC0.34□□□□□ -2.35
CNOT1A5YKK6 PRELID3BP1-201ENST00000457142 540 ntBASIC0.34□□□□□ -2.35
CNOT1A5YKK6 RNU6-902P-201ENST00000517212 91 ntBASIC0.34□□□□□ -2.35
CNOT1A5YKK6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.35
CNOT1A5YKK6 AC004817.2-201ENST00000561794 651 ntBASIC0.34□□□□□ -2.35
CNOT1A5YKK6 AC026271.5-201ENST00000577873 130 ntBASIC0.34□□□□□ -2.35
CNOT1A5YKK6 MIR4661-201ENST00000582720 75 ntBASIC0.34□□□□□ -2.35
CNOT1A5YKK6 AC010615.3-201ENST00000597319 394 ntBASIC0.34□□□□□ -2.35
CNOT1A5YKK6 AC008121.1-201ENST00000603244 268 ntBASIC0.34□□□□□ -2.35
CNOT1A5YKK6 AC025588.3-201ENST00000604182 274 ntBASIC0.34□□□□□ -2.35
CNOT1A5YKK6 AL021879.1-201ENST00000611756 288 ntBASIC0.34□□□□□ -2.35
CNOT1A5YKK6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CNOT1A5YKK6 RNU6-1035P-201ENST00000384477 107 ntBASIC0.34□□□□□ -2.36
CNOT1A5YKK6 MTCO1P56-201ENST00000401674 224 ntBASIC0.34□□□□□ -2.36
CNOT1A5YKK6 NDUFS5P1-201ENST00000405668 289 ntBASIC0.34□□□□□ -2.36
CNOT1A5YKK6 AL449283.1-202ENST00000418249 604 ntBASIC0.34□□□□□ -2.36
CNOT1A5YKK6 RPL23AP95-201ENST00000426806 265 ntBASIC0.34□□□□□ -2.36
CNOT1A5YKK6 RPS20P24-201ENST00000457473 361 ntBASIC0.34□□□□□ -2.36
CNOT1A5YKK6 AC099513.1-201ENST00000490423 301 ntBASIC0.34□□□□□ -2.36
CNOT1A5YKK6 AL133373.1-201ENST00000497098 94 ntBASIC0.34□□□□□ -2.36
CNOT1A5YKK6 RNU6-1095P-201ENST00000516148 108 ntBASIC0.34□□□□□ -2.36
CNOT1A5YKK6 SNORD19.2-201ENST00000516978 73 ntBASIC0.34□□□□□ -2.36
CNOT1A5YKK6 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.34□□□□□ -2.36
CNOT1A5YKK6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.34□□□□□ -2.36
CNOT1A5YKK6 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.34□□□□□ -2.36
CNOT1A5YKK6 MIR424-201ENST00000362227 98 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 RNU6-989P-201ENST00000362756 107 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 RNU6-374P-201ENST00000364146 108 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 Y_RNA.476-201ENST00000384347 108 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 PIGFP2-201ENST00000421400 651 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AC023512.1-201ENST00000444513 499 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 RNA5SP57-201ENST00000459463 123 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AL669831.4-202ENST00000590817 238 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 CLIC4P2-201ENST00000601934 717 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AC007349.4-201ENST00000608114 532 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AL121652.1-201ENST00000608851 448 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 USP9YP26-201ENST00000421008 661 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.33□□□□□ -2.36
CNOT1A5YKK6 USP9YP18-201ENST00000425912 695 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AL035410.1-201ENST00000427409 427 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 USP9YP24-201ENST00000434374 697 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 GTF2IP13-201ENST00000438487 386 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.33□□□□□ -2.36
CNOT1A5YKK6 USP9YP17-201ENST00000444617 696 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 PGBD4P5-201ENST00000445958 426 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 BUD31P2-201ENST00000449374 300 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AC108729.1-201ENST00000487812 947 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AC006518.2-201ENST00000542513 940 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AL589743.7-201ENST00000612637 233 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AL138726.1-201ENST00000614873 333 ntBASIC0.33□□□□□ -2.36
CNOT1A5YKK6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.33□□□□□ -2.36
CNOT1A5YKK6 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
CNOT1A5YKK6 SNORA51.6-201ENST00000384151 125 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 Y_RNA.559-201ENST00000384686 107 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms